CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os04g0323800

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 98.9 Os04g0323800 AK066833.1 - Hypothetical protein 7e-1 At3g14595 unknown protein S.X. H.G.
0.05 2.5 Os11g0183800 9639.m00752 - ARM repeat fold domain containing protein 1e-7 At1g77460 binding S.X. H.G.
0.03 1.4 Os02g0794300 9630.m05470 - Protein of unknown function DUF566 family protein 8e-3 At5g43160 unknown protein S.X. H.G.
0.02 1.0 Os02g0739900 CA763386 - Arabidopsis thaliana protein of unknown functionDUF813 family protein 2e+0 At4g03150 unknown protein S.X. H.G.
0.01 0.5 Os09g0453100 AK111288.1 - - 6e+0 At4g23100 GSH1 (GLUTAMATE-CYSTEINE LIGASE) S.X. H.G.
0.01 0.5 Os04g0250200 AK058584.1 - Hypothetical protein 8e-1 At2g12875 unknown protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
20.4 99.1 GSM67057 FL478 salt stressed replicate 3 GSE3053 Rice salt expression
18.0 98.9 GSM99870 TCHW P13_agami control, biological rep1 GSE4438 Expression data from rice under salinity stress
16.1 98.7 GSM99871 TCHW P14_agami control, biological rep2 GSE4438 Expression data from rice under salinity stress
14.4 98.6 GSM99862 TCHW P5_m103 salt stress, biological rep2 GSE4438 Expression data from rice under salinity stress
13.9 98.5 GSM99861 TCHW P4_m103 salt stress, biological rep1 GSE4438 Expression data from rice under salinity stress
13.1 98.4 GSM99872 TCHW P15_agami control, biological rep3 GSE4438 Expression data from rice under salinity stress
12.1 98.3 GSM99873 TCHW P16_agami salt stress, biological rep1 GSE4438 Expression data from rice under salinity stress
11.2 98.2 GSM99874 TCHW P17_agami salt stress, biological rep2 GSE4438 Expression data from rice under salinity stress
11.1 98.2 GSM99863 TCHW P6_m103 salt stress, biological rep3 GSE4438 Expression data from rice under salinity stress
11.0 98.2 GSM99858 TCHW P1_m103 control, biological rep1 GSE4438 Expression data from rice under salinity stress
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.13 2e-70 268 Os01g0184200 AK120391.1 - Conserved hypothetical protein 1e-1 At5g18620 CHR17 (CHROMATIN REMODELING FACTOR17) C.G. S.X.
0.01 1e+0 36 Os01g0820800 AK106944.1 - Conserved hypothetical protein 3e+0 At3g26510 octicosapeptide/Phox/Bem1p (PB1) domain-containing protein C.G. S.X.
0.01 1e+0 36 Os02g0150900 AK121424.1 - Conserved hypothetical protein 4e-3 At4g31410 unknown protein C.G. S.X.
0.01 1e+0 36 Os09g0535000 AK069832.1 - Triosephosphate isomerase, chloroplast precursor(EC 5.3.1.1) (TIM) (Triose-phosphate isomerase) 5e-15 At2g21170 TIM (TRIOSEPHOSPHATE ISOMERASE) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 7e-1 36 Arabidopsis thaliana At3g14595 820686 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PBO - - - C.G. S.X.
0.03 2e-1 38 Glycine max GmaAffx.27618.1.S1_at BI427286 - - 8e-1 At5g41390 - C.G. S.X.
0.02 1e+0 34 Hordeum vulgare Contig6551_s_at Contig6551 - - 1e+0 At2g15440 unknown protein C.G. S.X.
0.02 9e-1 36 Populus trichocarpa PtpAffx.9692.1.S1_at DN493370 - - 8e-2 At1g11440 - C.G. S.X.
0.02 3e+0 34 Triticum aestivum Ta.11616.1.A1_at BQ170464 - - 1e+1 At5g46980 invertase/pectin methylesterase inhibitor family protein C.G. S.X.
0.02 8e-1 34 Vitis vinifera 1607848_at CB339435 hypothetical protein LOC100248102 - 1e+0 At4g29530 2,3-diketo-5-methylthio-1-phosphopentane phosphatase family C.G. S.X.
0.02 4e+0 32 Zea mays Zm.6461.1.A1_at CK828103 hypothetical protein LOC100273899 - 2e+0 At3g60180 uridylate kinase, putative / uridine monophosphate kinase, putative / UMP kinase, putative C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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