CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os04g0303100

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.57 77.0 Os04g0303100 9632.m05838 - Protein kinase domain containing protein 8e-5 At1g16670 protein kinase family protein S.X. H.G.
0.86 96.4 Os08g0454500 9636.m03547 - Flavonoid 7-O-methyltransferase (EC 2.1.1.6) 8e+0 At5g05380 PRA1.B3 (PRENYLATED RAB ACCEPTOR 1.B3) S.X. H.G.
0.67 87.2 Os03g0658400 9631.m04412 - - 6e+0 At2g16019 unknown protein S.X. H.G.
0.57 77.0 Os06g0479800 9634.m02732 - - 3e+0 At5g37415 sequence-specific DNA binding / transcription factor S.X. H.G.
0.48 63.7 Os06g0111901 NM_185397.1 - - 3e-1 At1g71740 unknown protein S.X. H.G.
0.48 63.7 Os11g0576700 9639.m03325 - Hypothetical protein 3e-1 At5g19151 unknown protein S.X. H.G.
0.46 60.9 Os11g0552300 9639.m03151 - - 1e-1 At5g60680 unknown protein S.X. H.G.
0.44 58.1 Os06g0181900 AK111463.1 - Hypothetical protein 7e-2 At1g27110 binding S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
38.3 99.8 GSM422676 Control GSE16865 Heterologous microarrays for the study of drought stress in Musa
32.3 99.8 GSM377073 Genomic DNA - 45 day old leaf sample - mutant d2943 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
32.0 99.7 GSM377072 Genomic DNA - 45 day old leaf sample - mutant d1137 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
29.9 99.7 GSM377084 Genomic DNA - 45 day old leaf sample - mutant f1856 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
26.7 99.6 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
25.9 99.5 GSM377075 Genomic DNA - 45 day old leaf sample - mutant g650 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
22.4 99.3 GSM377071 Genomic DNA - 45 day old leaf sample - mutant d256 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
21.8 99.2 GSM377080 Genomic DNA - 45 day old leaf sample - mutant g6728 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
21.5 99.2 GSM377081 Genomic DNA - 45 day old leaf sample - mutant g7534 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
21.2 99.2 GSM377076 Genomic DNA - 45 day old leaf sample - mutant g6485 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.70 1e-177 624 Os04g0302000 9632.m02192 - - 2e-5 At4g32300 SD2-5 (S-DOMAIN-2 5) C.G. S.X.
0.62 0 1110 Os04g0303500 9632.m02208 - Protein kinase domain containing protein 5e-3 At5g59000 zinc finger (C3HC4-type RING finger) family protein C.G. S.X.
0.40 0 1479 Os04g0303200 AK064152.1 - Hypothetical protein 1e+1 At5g59160 TOPP2 C.G. S.X.
0.29 0 1185 Os04g0302300 AK072639.1 - Conserved hypothetical protein 5e-1 At4g04500 protein kinase family protein C.G. S.X.
0.17 5e-20 101 Os01g0204100 NM_188329.1 - - 7e-5 At3g58690 protein kinase family protein C.G. S.X.
0.16 1e-91 339 Os04g0302400 AK069467.1 - Conserved hypothetical protein 6e-2 At3g44950 glycine-rich protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 8e-5 50 Arabidopsis thaliana At1g16670 838236 protein kinase family protein F:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:cellular_component unknown;MPOBFVA - - - C.G. S.X.
0.02 4e-1 38 Glycine max GmaAffx.24353.3.S1_at BG043550 - - 8e-10 At2g28590 protein kinase family protein C.G. S.X.
0.10 2e-10 67 Hordeum vulgare Contig18914_at Contig18914 - - 3e-2 At3g02810 protein kinase family protein C.G. S.X.
0.04 4e-4 48 Populus trichocarpa PtpAffx.224679.1.S1_at pmrna43461 hypothetical protein - 1e-1 At5g48810 CB5-D (CYTOCHROME B5 ISOFORM D) C.G. S.X.
0.07 1e-6 56 Triticum aestivum Ta.25825.1.A1_at CD453373 - - 9e-2 At1g48320 thioesterase family protein C.G. S.X.
0.07 2e-5 50 Vitis vinifera 1620691_at AY427150.1 - - 1e-3 At4g28670 protein kinase family protein C.G. S.X.
0.12 9e-15 81 Zea mays Zm.5225.1.A1_at AI615012 hypothetical protein LOC100273591 - 4e-2 At5g48740 leucine-rich repeat family protein / protein kinase family protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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