CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os04g0302300

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.56 76.3 Os04g0302300 AK072639.1 - Conserved hypothetical protein 5e-1 At4g04500 protein kinase family protein S.X. H.G.
0.40 51.1 Os12g0405400 AK066879.1 - Conserved hypothetical protein 2e-2 At2g30560 glycine-rich protein S.X. H.G.
0.33 38.8 Os01g0968600 9629.m07307 - Ferritin/ribonucleotide reductase-like familyprotein 4e+0 At3g15356 legume lectin family protein S.X. H.G.
0.22 19.4 Os02g0677800 AK064865.1 - 40S ribosomal protein S13-2 5e-13 At3g60770 40S ribosomal protein S13 (RPS13A) S.X. H.G.
0.21 17.9 Os02g0807100 AK119364.1 - - 7e-9 At5g65685 soluble glycogen synthase-related S.X. H.G.
0.18 13.7 Os02g0290000 AK102280.1 - TPR-like domain containing protein 1e-1 At1g17630 pentatricopeptide (PPR) repeat-containing protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
178.0 100.0 GSM422672 Drought GSE16865 Heterologous microarrays for the study of drought stress in Musa
19.6 99.1 GSM377072 Genomic DNA - 45 day old leaf sample - mutant d1137 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
17.3 98.9 GSM377071 Genomic DNA - 45 day old leaf sample - mutant d256 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
15.9 98.7 GSM377075 Genomic DNA - 45 day old leaf sample - mutant g650 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
14.4 98.6 GSM377084 Genomic DNA - 45 day old leaf sample - mutant f1856 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
12.6 98.4 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
11.1 98.2 GSM377080 Genomic DNA - 45 day old leaf sample - mutant g6728 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
9.5 97.9 GSM377073 Genomic DNA - 45 day old leaf sample - mutant d2943 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
9.5 97.9 GSM377085 Genomic DNA - 45 day old leaf sample - mutant f2045 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
9.1 97.9 GSM377077 Genomic DNA - 45 day old leaf sample - mutant g6489 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.34 7e-147 523 Os04g0302400 AK069467.1 - Conserved hypothetical protein 6e-2 At3g44950 glycine-rich protein C.G. S.X.
0.29 0 1185 Os04g0303100 9632.m05838 - Protein kinase domain containing protein 8e-5 At1g16670 protein kinase family protein C.G. S.X.
0.27 1e-83 313 Os04g0303200 AK064152.1 - Hypothetical protein 1e+1 At5g59160 TOPP2 C.G. S.X.
0.24 0 868 Os04g0303500 9632.m02208 - Protein kinase domain containing protein 5e-3 At5g59000 zinc finger (C3HC4-type RING finger) family protein C.G. S.X.
0.19 0 714 Os04g0302000 9632.m02192 - - 2e-5 At4g32300 SD2-5 (S-DOMAIN-2 5) C.G. S.X.
0.07 4e-31 139 Os01g0204100 NM_188329.1 - - 7e-5 At3g58690 protein kinase family protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.01 5e-1 38 Arabidopsis thaliana At4g04500 825780 protein kinase family protein F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVA - - - C.G. S.X.
0.02 8e-1 38 Glycine max GmaAffx.82595.1.S1_at AI988269 stress-induced receptor-like kinase - 2e-2 At5g38560 protein kinase family protein C.G. S.X.
0.03 3e-10 67 Hordeum vulgare Contig18914_at Contig18914 - - 3e-2 At3g02810 protein kinase family protein C.G. S.X.
0.01 5e-2 42 Populus trichocarpa PtpAffx.224553.1.S1_s_at pmrna43191 hypothetical protein - 3e-4 At1g56720 protein kinase family protein C.G. S.X.
0.01 2e-6 56 Triticum aestivum Ta.25825.1.A1_at CD453373 - - 9e-2 At1g48320 thioesterase family protein C.G. S.X.
0.01 3e+0 34 Vitis vinifera 1620691_at AY427150.1 - - 1e-3 At4g28670 protein kinase family protein C.G. S.X.
0.01 6e-8 59 Zea mays Zm.5225.1.A1_at AI615012 hypothetical protein LOC100273591 - 4e-2 At5g48740 leucine-rich repeat family protein / protein kinase family protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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