CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os04g0265400

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.67 87.2 Os04g0265400 9632.m01771 - - 9e+0 At1g32920 unknown protein S.X. H.G.
0.80 94.6 Os11g0138225 9639.m00338 - - 1e+1 At5g16980 NADP-dependent oxidoreductase, putative S.X. H.G.
0.71 89.6 Os09g0117301 9637.m00131 - - 2e+0 At2g22460 unknown protein S.X. H.G.
0.61 81.2 Os08g0275400 9636.m01744 - - 1e+0 At5g50740 metal ion binding S.X. H.G.
0.57 77.0 Os05g0287100 9633.m01925 - - 9e+0 At5g27541 S.X. H.G.
0.46 60.9 Os03g0601400 9631.m03890 - - 5e+0 At5g06470 glutaredoxin family protein S.X. H.G.
0.44 58.1 Os01g0367800 NM_193806.1 - - 3e-1 At5g09310 unknown protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
37.3 99.8 GSM422672 Drought GSE16865 Heterologous microarrays for the study of drought stress in Musa
31.9 99.7 GSM377077 Genomic DNA - 45 day old leaf sample - mutant g6489 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
31.0 99.7 GSM377084 Genomic DNA - 45 day old leaf sample - mutant f1856 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
28.2 99.6 GSM377076 Genomic DNA - 45 day old leaf sample - mutant g6485 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
27.8 99.6 GSM377075 Genomic DNA - 45 day old leaf sample - mutant g650 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
27.1 99.6 GSM377073 Genomic DNA - 45 day old leaf sample - mutant d2943 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
26.3 99.5 GSM377085 Genomic DNA - 45 day old leaf sample - mutant f2045 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
24.8 99.5 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
22.5 99.3 GSM377080 Genomic DNA - 45 day old leaf sample - mutant g6728 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
22.4 99.3 GSM377078 Genomic DNA - 45 day old leaf sample - mutant g6603 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.33 1e-6 54 Os03g0440500 9634.m01568 - - 4e+0 At3g11160 unknown protein C.G. S.X.
0.21 6e-18 91 Os04g0222800 9632.m01342 - - 1e+0 At5g55460 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein C.G. S.X.
0.12 3e-16 85 Os11g0648700 AK106845.1 - Hypothetical protein 4e+0 At2g34850 MEE25 (maternal effect embryo arrest 25) C.G. S.X.
0.11 6e-18 91 Os03g0439800 D15919 - Conserved hypothetical protein 3e+0 At2g03955 - C.G. S.X.
0.02 1e-6 54 Os08g0288000 AK099411.1 - Hypothetical protein 2e+0 At4g25170 - C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.06 9e+0 30 Arabidopsis thaliana At1g32920 840186 unknown protein F:molecular_function unknown;P:response to wounding;C:endomembrane system;P - - - C.G. S.X.
0.03 1e+1 30 Glycine max HgAffx.9762.1.S1_at CB378739 - - 1e+0 At1g17430 hydrolase, alpha/beta fold family protein C.G. S.X.
0.04 7e-2 36 Hordeum vulgare Contig10522_at Contig10522 - - 5e+0 At5g03270 unknown protein C.G. S.X.
0.04 1e+1 30 Populus trichocarpa PtpAffx.220748.1.S1_at pmrna37169 hypothetical protein - 1e+1 At5g35526 unknown protein C.G. S.X.
0.04 2e+0 32 Triticum aestivum Ta.21296.1.S1_at CA670118 - - 1e+0 At4g09260 unknown protein C.G. S.X.
0.04 3e+0 30 Vitis vinifera 1616859_at CF514086 hypothetical protein LOC100245186 - 4e+0 At5g67490 unknown protein C.G. S.X.
0.03 4e+0 30 Zea mays Zm.4834.1.S1_at CF602448 hypothetical protein LOC100279345 - 4e+0 At5g26890 unknown protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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