Gene omics information

Query gene ID Os04g0257500
Gene name
Organism Oryza sativa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9198.9Os04g0257500AK107745.1-Ethylene-responsive element binding protein7e-3At1g06160ORA59 (OCTADECANOID-RESPONSIVE ARABIDOPSIS AP2/ERF 59)S.X.H.G.
0.9198.9Os04g02325009632.m01461--1e+0At1g13440GAPC2 (GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE C2)S.X.H.G.
0.8395.8Os03g0162300AK110675.1-Hypothetical protein4e-1At2g21660CCR2 (COLD, CIRCADIAN RHYTHM, AND RNA BINDING 2)S.X.H.G.
0.7189.6Os12g05117009640.m03180--1e-1At3g03030F-box family proteinS.X.H.G.
0.6787.2Os08g03031009636.m02060--5e-2At5g66230unknown proteinS.X.H.G.
0.6382.7Os01g0288100NM_183572.1--1e-1At1g07175unknown proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
121.0100.0GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in Musa
72.799.9GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in Musa
59.399.9GSM422674Musa_DNA_RICEGSE16865Heterologous microarrays for the study of drought stress in Musa
15.798.7GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
12.198.3GSM377082Genomic DNA - 45 day old leaf sample - mutant g9799GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
11.398.2GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
11.298.2GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
9.898.0GSM377086Genomic DNA - 45 day old leaf sample - IR64 wtcheckGSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
9.898.0GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
9.197.9GSM377078Genomic DNA - 45 day old leaf sample - mutant g6603GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.342e-60234Os03g0150200AY339376.1-Ethylene-responsive element binding protein8e-2At1g06160ORA59 (OCTADECANOID-RESPONSIVE ARABIDOPSIS AP2/ERF 59)C.G.S.X.
0.135e-30133Os04g05475009632.m04453--5e-4At5g47220ERF2 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 2)C.G.S.X.
0.123e-22107Os01g0657400AY323486.1-Ethylene responsive element binding factor 5(AtERF5)9e-3At4g17490ATERF6 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 6)C.G.S.X.
0.115e-30133Os04g0547600AY339379.1-Pathogenesis-related transcriptional factor andERF domain containing protein3e-3At4g27950CRF4 (CYTOKININ RESPONSE FACTOR 4)C.G.S.X.
0.113e-22107Os02g0655200AY339378.1-Ethylene responsive element binding factor3(OsERF3)2e-1At4g27950CRF4 (CYTOKININ RESPONSE FACTOR 4)C.G.S.X.
0.094e-1583Os06g0160500NM_185617.1--1e-1At1g06160ORA59 (OCTADECANOID-RESPONSIVE ARABIDOPSIS AP2/ERF 59)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.067e-342Arabidopsis thalianaAt1g06160837125ORA59 (OCTADECANOID-RESPONSIVE ARABIDOPSIS AP2/ERF 59)encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.---C.G.S.X.
0.187e-1065Glycine maxGmaAffx.15015.1.S1_atBI787734--1e-9At2g31230ATERF15 (Ethylene-responsive element binding factor 15)C.G.S.X.
0.127e-23107Hordeum vulgareContig17873_atContig17873--4e-1At4g17490ATERF6 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 6)C.G.S.X.
0.041e-552Populus trichocarpaPtpAffx.208714.1.S1_atpmrna17280AP2/ERF domain-containing transcription factor-6e-9At3g23240ERF1 (ETHYLENE RESPONSE FACTOR 1)C.G.S.X.
0.232e-37157Triticum aestivumTaAffx.81079.1.S1_atCA689720--6e-2At1g06160ORA59 (OCTADECANOID-RESPONSIVE ARABIDOPSIS AP2/ERF 59)C.G.S.X.
0.082e+032Vitis vinifera1609683_atCF604955hypothetical protein LOC100249982-2e-11At2g47520AP2 domain-containing transcription factor, putativeC.G.S.X.
0.133e-1271Zea maysZm.17956.1.A1_atCF637428--2e+0At3g20570plastocyanin-like domain-containing proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
LGO:0006355Any process that modulates the frequency, rate or extent of DNA-dependent transcription.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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