Gene omics information

Query gene ID Os04g0235600
Gene name
Organism Oryza sativa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9198.9Os04g0235600CR291556-ATP synthase B chain (EC 3.6.3.14) (Subunit I)2e-42Atcg00130-S.X.H.G.
0.8395.8Os01g0792400AK062797.1-Photosystem I assembly protein ycf42e-53Atcg00520-S.X.H.G.
0.8094.6Os01g0749400AK067731.1-Glycosyl transferase, family 20 domain containingprotein2e-12At1g06410ATTPS7S.X.H.G.
0.7391.1Os06g0598500AK058623.1-Ribulose bisphosphate carboxylase large chainprecursor (EC 4.1.1.39) (RuBisCO large subunit)0Atcg00490-S.X.H.G.
0.6787.2Os10g0527100BI795990-Chloroplast ATP synthase a chain precursor (EC3.6.3.14) (ATPase subunit IV)2e+0At5g15850COL1 (constans-like 1)S.X.H.G.
0.6079.7Os01g0338600AK066580.1-Conserved hypothetical protein6e-29At2g43945unknown proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
5.496.8GSM377079Genomic DNA - 45 day old leaf sample - mutant g6686GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
5.096.6GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
4.896.5GSM377086Genomic DNA - 45 day old leaf sample - IR64 wtcheckGSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
4.296.0GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
4.095.9GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
3.995.8GSM377078Genomic DNA - 45 day old leaf sample - mutant g6603GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
3.895.7GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
3.895.7GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
3.795.6GSM377082Genomic DNA - 45 day old leaf sample - mutant g9799GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
3.795.6GSM377080Genomic DNA - 45 day old leaf sample - mutant g6728GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.6703021Os10g0527100BI795990-Chloroplast ATP synthase a chain precursor (EC3.6.3.14) (ATPase subunit IV)2e+0At5g15850COL1 (constans-like 1)C.G.S.X.
0.083e-654Os12g0297500AK072331.1-Glycoside hydrolase, starch-binding domaincontaining protein4e-17At5g26570ATGWD3C.G.S.X.
0.022e+034Os01g0578700AK099956.1-Hypothetical protein2e+0At5g63370protein kinase family proteinC.G.S.X.
0.016e-136Os05g0583500D43360-PX-associated domain containing protein4e+0At4g00355unknown proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.592e-42173Arabidopsis thalianaAtcg00130--ATPase F subunit.---C.G.S.X.
0.188e-46184Glycine maxGma.17682.1.S1_atBG839162--0Atcg00120-C.G.S.X.
0.042e+032Hordeum vulgareHW02F14u_atHW02F14u--3e+0At4g19770glycosyl hydrolase family 18 proteinC.G.S.X.
0.601e-115416Populus trichocarpaPtpAffx.2270.2.A1_a_atCV256802--2e-163Atcg00130-C.G.S.X.
0.571e-136486Triticum aestivumTaAffx.128565.9.S1_atCA660562--3e-13Atcg00130-C.G.S.X.
0.081e-80297Vitis vinifera1614676_s_atBQ793152ATP synthase subunit a, chloroplastic-0Atcg00120-C.G.S.X.
0.890841Zea maysZmAffx.1433.1.S1_at11990232-18ATP synthase B chain-7e-45Atcg00130-C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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