CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os04g0210700

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.75 91.9 Os04g0210700 9632.m01205 - Conserved hypothetical protein 2e+0 At2g26240 unknown protein S.X. H.G.
0.80 94.6 Os11g0472800 9639.m02553 - - 3e+0 At5g27840 TOPP8 S.X. H.G.
0.79 93.6 Os10g0378025 NM_196167.1 - - 4e+0 At5g50915 basic helix-loop-helix (bHLH) family protein S.X. H.G.
0.75 91.9 Os11g0180200 CB659899 - Tyrosine specific protein phosphatase familyprotein 7e+0 At5g63740 zinc finger protein-related S.X. H.G.
0.74 91.4 Os09g0359700 9637.m01649 - Target SNARE coiled-coil region domain containingprotein 2e-3 At3g45280 SYP72 (SYNTAXIN OF PLANTS 72) S.X. H.G.
0.73 91.1 Os02g0463100 9630.m02493 - - 5e-3 At4g09660 - S.X. H.G.
0.72 89.8 Os09g0261400 AK105353.1 - - 3e-1 At1g51080 unknown protein S.X. H.G.
0.67 87.2 Os05g0236600 9633.m01287 - - 6e-2 At4g19090 unknown protein S.X. H.G.
0.65 83.8 Os02g0188900 9630.m00874 - Cyclin-like F-box domain containing protein 6e-1 At3g48920 AtMYB45 (myb domain protein 45) S.X. H.G.
0.65 83.8 Os06g0560900 9634.m03471 - - 8e-2 At4g09660 - S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
115.4 100.0 GSM422676 Control GSE16865 Heterologous microarrays for the study of drought stress in Musa
49.7 99.9 GSM422672 Drought GSE16865 Heterologous microarrays for the study of drought stress in Musa
23.8 99.4 GSM377075 Genomic DNA - 45 day old leaf sample - mutant g650 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
21.2 99.2 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
20.6 99.1 GSM377072 Genomic DNA - 45 day old leaf sample - mutant d1137 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
20.6 99.1 GSM377081 Genomic DNA - 45 day old leaf sample - mutant g7534 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
20.5 99.1 GSM377078 Genomic DNA - 45 day old leaf sample - mutant g6603 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
19.5 99.1 GSM377080 Genomic DNA - 45 day old leaf sample - mutant g6728 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
18.8 99.0 GSM377071 Genomic DNA - 45 day old leaf sample - mutant d256 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
18.7 99.0 GSM377076 Genomic DNA - 45 day old leaf sample - mutant g6485 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 3e+0 32 Os02g0286966 9630.m01754 - - 2e+0 At1g28030 oxidoreductase, 2OG-Fe(II) oxygenase family protein C.G. S.X.
0.03 3e+0 32 Os12g0615900 AK107784.1 - The start codon is not identified. 2e+0 At1g65030 transducin family protein / WD-40 repeat family protein C.G. S.X.
0.02 3e+0 32 Os01g0369500 AK100805.1 - C2 domain containing protein 2e+0 At1g18080 ATARCA C.G. S.X.
0.02 3e+0 32 Os06g0106100 AK112060.1 - Cwf15/Cwc15 cell cycle control protein familyprotein 6e-10 At3g13200 EMB2769 (EMBRYO DEFECTIVE 2769) C.G. S.X.
0.02 3e+0 32 Os08g0129700 AB099292.1 - NAD-dependent epimerase/dehydratase family protein 7e-14 At1g30620 MUR4 (MURUS 4) C.G. S.X.
0.00 3e+0 32 Os09g0265800 AK120499.1 - HGWP repeat containing protein 6e-2 At1g71870 MATE efflux family protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.06 2e+0 32 Arabidopsis thaliana At2g26240 817164 unknown protein F:unknown;P:biological_process unknown;C:mitochondrion;MPBFO - - - C.G. S.X.
0.04 2e+0 32 Glycine max GmaAffx.92334.1.S1_at CF808059 - - 7e-45 At5g27540 MIRO1 (Miro-related GTP-ase 1) C.G. S.X.
0.05 3e+0 30 Hordeum vulgare Contig21489_at Contig21489 - - 8e-1 At3g56070 ROC2 (ROTAMASE CYCLOPHILIN 2) C.G. S.X.
0.05 2e+0 32 Populus trichocarpa PtpAffx.210435.1.S1_at pmrna20489 hypothetical protein - 9e-1 At1g32510 anac011 (Arabidopsis NAC domain containing protein 11) C.G. S.X.
0.06 6e+0 30 Triticum aestivum TaAffx.56151.1.S1_at CA656651 - - 2e+0 At3g04840 40S ribosomal protein S3A (RPS3aA) C.G. S.X.
0.06 1e-1 34 Vitis vinifera 1611994_a_at CF214487 hypothetical protein LOC100260925 - 7e-8 At1g32230 RCD1 (RADICAL-INDUCED CELL DEATH1) C.G. S.X.
0.04 1e+1 28 Zea mays Zm.6125.1.A1_at BE129683 - - 9e-1 At3g63020 unknown protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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