Gene omics information

Query gene ID Os04g0196200
Gene name
Organism Oryza sativa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6079.7Os04g01962009632.m01071-O-methyltransferase, family 2 domain containingprotein1e-1At3g63410APG1 (ALBINO OR PALE GREEN MUTANT 1)S.X.H.G.
0.5068.0Os04g0107700AK110974.1-Peptidase C1A, papain family protein3e-3At3g19400cysteine proteinase, putativeS.X.H.G.
0.4660.9Os05g0365600CB096565-Hydroxyisourate hydrolase2e+0At3g60130BGLU16 (BETA GLUCOSIDASE 16)S.X.H.G.
0.4051.1Os03g0404800AK099537.1-3-beta hydroxysteroid dehydrogenase/isomerasefamily protein4e-2At1g47290AT3BETAHSD/D1 (3BETA-HYDROXYSTEROID-DEHYDROGENASE/DECARBOXYLASE ISOFORM 1)S.X.H.G.
0.3032.7Os06g01923009634.m00877--3e-1At1g64340unknown proteinS.X.H.G.
0.2016.5Os08g0351200CB677679-Plant protein of unknown function family protein1e+1At4g09490RNase H domain-containing proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
38.999.8GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in Musa
34.299.8GSM159269Cold stress, biological rep 2GSE6901Expression data for stress treatment in rice seedlings
33.799.8GSM159270Cold stress, biological rep 3GSE6901Expression data for stress treatment in rice seedlings
30.799.7GSM159268Cold stress, biological rep 1GSE6901Expression data for stress treatment in rice seedlings
30.699.7GSM1592597-day-old Seedling, biological rep 1GSE6901Expression data for stress treatment in rice seedlings
29.699.7GSM1592607-day-old Seedling, biological rep 2GSE6901Expression data for stress treatment in rice seedlings
24.899.5GSM1592617-day-old Seedling, biological rep 3GSE6901Expression data for stress treatment in rice seedlings
15.198.6GSM116400Seedling_IAA treated_rep2GSE5167Rice seedling hormone treatment
10.798.1GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in Musa
7.697.5GSM116399Seedling_IAA treated_rep1GSE5167Rice seedling hormone treatment
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.541e-49198Os06g02408009634.m01319-O-methyltransferase, family 2 domain containingprotein2e+0At1g66080unknown proteinC.G.S.X.
0.104e-963Os11g05395009639.m03032-O-methyltransferase, family 2 domain containingprotein9e+0At4g14710acireductone dioxygenase [iron(II)-requiring]/ metal ion bindingC.G.S.X.
0.071e-242Os12g04413009640.m02431-O-methyltransferase, family 2 protein8e+0At5g52160protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinC.G.S.X.
0.054e-344Os11g03073009639.m01888-Herbicide safener binding protein6e-1At3g16190isochorismatase hydrolase family proteinC.G.S.X.
0.051e-242Os10g0118000AK069721.1-O-methyltransferase ZRP4 (EC 2.1.1.-) (OMT)3e+0At5g54160ATOMT1 (O-METHYLTRANSFERASE 1)C.G.S.X.
0.041e-656Os10g0118200AK069308.1-O-methyltransferase ZRP4 (EC 2.1.1.-) (OMT)2e-1At1g21130O-methyltransferase, putativeC.G.S.X.
0.044e-654Os09g0344500AK072740.1-O-methyltransferase ZRP4 (EC 2.1.1.-) (OMT)3e+0At4g15700glutaredoxin family proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.021e-138Arabidopsis thalianaAt3g63410825516APG1 (ALBINO OR PALE GREEN MUTANT 1)Encodes a MPBQ/MSBQ methyltransferase located in the chloroplast inner envelope membrane. Mutant plants lack plastoquinone (PQ), suggesting that the APG1 protein is involved in the methylation step of PQ biosynthesis. The gene product is also involved in tocopherol (vitamin E) biosynthesis.---C.G.S.X.
0.032e-138Glycine maxPsAffx.psZS003xJ02f_atPsAffx.psZS003xJ02f--5e+0At2g45830DTA2 (DOWNSTREAM TARGET OF AGL15 2)C.G.S.X.
0.101e-240Hordeum vulgareContig8811_atContig8811--2e+0At5g26170WRKY50C.G.S.X.
0.036e-136Populus trichocarpaPtpAffx.44606.1.A1_atCV225637hypothetical protein-3e-1At5g50010transcription factor/ transcription regulatorC.G.S.X.
0.171e-448Triticum aestivumTaAffx.85899.2.S1_atCA618604--4e+0At2g35230VQ motif-containing proteinC.G.S.X.
0.041e-136Vitis vinifera1619517_atCF202125.1O-methyltransferase-4e-1At4g0900014-3-3-like protein GF14 chi / general regulatory factor 1 (GRF1)C.G.S.X.
0.131e-240Zea maysZm.18054.1.A1_a_atCK985730hypothetical protein LOC100279833-2e+0At4g15120VQ motif-containing proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
LGO:0006826The directed movement of iron (Fe) ions into, out of, within or between cells.
LGO:0006879Any process involved in the maintenance of an internal equilibrium of iron ions at the level of a cell.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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