Gene omics information

Query gene ID Os04g0173800
Gene name
Organism Oryza sativa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9198.9Os04g0173800M24504.1-Lectin precursor (Agglutinin)1e-1At2g43610glycoside hydrolase family 19 proteinS.X.H.G.
0.9198.9Os04g0618400AK108024.1-Hypothetical protein4e+0At5g43480unknown proteinS.X.H.G.
0.8094.6Os08g0473600AK064300.1-Alpha-amylase isozyme 3E precursor (EC 3.2.1.1)(1,4-alpha-D-glucan glucanohydrolase)9e-1Atmg00050-S.X.H.G.
0.7793.1Os12g06400009640.m04363-Hypothetical protein3e+0At5g36910THI2.2 (THIONIN 2.2)S.X.H.G.
0.7391.1Os01g0111600AK110620.1-Phosphatidylethanolamine-binding protein familyprotein1e-4At1g18100E12A11S.X.H.G.
0.6787.2Os07g0259100AY434734.1-Ethylene receptor9e-2At1g77200AP2 domain-containing transcription factor TINY, putativeS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
146.2100.0GSM302914emb6D_rep1GSE11966Expression data from rice embryo,endosperm,root,leaf and seedling
101.2100.0GSM195228EmbryoGSE7951Genome-wide gene expression profiling of rice stigma
82.8100.0GSM302915emb6D_rep2GSE11966Expression data from rice embryo,endosperm,root,leaf and seedling
28.699.6GSM240996Zhonghua11 7 DAF, biological replicate 3GSE9498Global gene expression profiles of Oryza sativa wild type Zhonghua11 and mutant gif1 in filling stage
15.398.7GSM275405Azucena root tip_At the wax layer_rep1GSE10857Gene expression of rice root tips before, at and buckled by a hard layer in two rice varieties
12.698.4GSM240995Zhonghua11 7 DAF, biological replicate 2GSE9498Global gene expression profiles of Oryza sativa wild type Zhonghua11 and mutant gif1 in filling stage
9.397.9GSM240994Zhonghua11 7 DAF, biological replicate 1GSE9498Global gene expression profiles of Oryza sativa wild type Zhonghua11 and mutant gif1 in filling stage
7.197.4GSM387556Transgenic line 4, biological rep. 1GSE15448Glycinebetaine-induced water-stress tolerance in codA-expressing transgenic indica rice
6.197.1GSM240998gif1 7 DAF, biological replicate 2GSE9498Global gene expression profiles of Oryza sativa wild type Zhonghua11 and mutant gif1 in filling stage
4.896.5GSM240999gif1 7 DAF, biological replicate 3GSE9498Global gene expression profiles of Oryza sativa wild type Zhonghua11 and mutant gif1 in filling stage
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.072e-861Os06g0726100Z29962.1-Endochitinase precursor (EC 3.2.1.14)1e-4At3g12500ATHCHIB (ARABIDOPSIS THALIANA BASIC CHITINASE)C.G.S.X.
0.072e-861Os06g0726200AK061042.1-Endochitinase precursor (EC 3.2.1.14)2e-4At3g12500ATHCHIB (ARABIDOPSIS THALIANA BASIC CHITINASE)C.G.S.X.
0.051e-965Os02g0605900AK064754.1-Chitinase (EC 3.2.1.14) A5e-1At3g54420ATEP3C.G.S.X.
0.023e-448Os09g0442300CB666183-Oryzain gamma chain precursor (EC 3.4.22.-)4e-30At5g60360AALP (Arabidopsis aleurain-like protease)C.G.S.X.
0.021e-346Os01g0112100AK100946.1--2e+0At3g13235ubiquitin family proteinC.G.S.X.
0.013e-448Os01g0816700AK100654.1-L-ascorbate oxidase homolog precursor (EC1.10.3.3) (Ascorbase)2e-8At3g13390sks11 (SKU5 Similar 11)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.051e-138Arabidopsis thalianaAt2g43610818963glycoside hydrolase family 19 proteinF:chitin binding, chitinase activity;P:cell wall macromolecule catabolic process;C:plasma membrane;PBFOVM---C.G.S.X.
0.035e-240Glycine maxGmaAffx.92499.1.S1_s_atCF809203Win gene encoding wound-induced protein-2e-15At3g04720PR4 (PATHOGENESIS-RELATED 4)C.G.S.X.
0.283e-75282Hordeum vulgareContig11534_atContig11534--1e-1At5g21910unknown proteinC.G.S.X.
0.048e-136Populus trichocarpaPtpAffx.220086.1.S1_atpmrna36400hypothetical protein-1e-3At3g29075glycine-rich proteinC.G.S.X.
0.355e-72272Triticum aestivumTaAffx.69777.1.S1_atJ02961.1--1e-4At2g43570chitinase, putativeC.G.S.X.
0.043e-342Vitis vinifera1617192_atAY137377.1class IV chitinase-4e-2At2g43570chitinase, putativeC.G.S.X.
0.064e-652Zea maysZm.12391.1.S1_atCF349132endochitinase PR4-1e-1At3g54420ATEP3C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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