CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os04g0121100

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.89 96.9 Os04g0121100 9632.m00213 - Peptidase S8 and S53, subtilisin, kexin, sedolisindomain containing protein 1e+0 At4g15040 identical protein binding / serine-type endopeptidase S.X. H.G.
0.56 76.3 Os06g0119100 AK065857.1 - Protein of unknown function DUF594 family protein 3e-1 At4g12050 DNA-binding protein-related S.X. H.G.
0.41 52.4 Os10g0159600 AK064267.1 - Heat shock protein Hsp20 domain containing protein 3e+0 At2g03680 SPR1 (SPIRAL1) S.X. H.G.
0.36 44.0 Os07g0105900 AK059175.1 - NB-ARC domain containing protein 1e-2 At2g22430 ATHB6 S.X. H.G.
0.34 40.0 Os07g0159700 9635.m00597 - Protein kinase domain containing protein 3e-2 At3g17420 GPK1 S.X. H.G.
0.31 34.5 Os03g0135200 AK059226.1 - Glutathione S-transferase GST 9 (EC 2.5.1.18) 2e+0 At4g10090 unknown protein S.X. H.G.
0.31 34.5 Os02g0256100 AK059595.1 - Glycoside hydrolase, family 28 protein 1e-24 At4g23820 glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein S.X. H.G.
0.29 31.1 Os08g0433400 AK059468.1 - Myb, DNA-binding domain containing protein 2e-20 At3g01140 MYB106 (myb domain protein 106) S.X. H.G.
0.28 31.1 Os02g0816200 AK060243.1 - Lipolytic enzyme, G-D-S-L family protein 2e-4 At3g04290 LTL1 (LI-TOLERANT LIPASE 1) S.X. H.G.
0.28 31.1 Os07g0166700 AY332473.1 - Protein kinase domain containing protein 4e-1 At1g09483 unknown protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
32.3 99.8 GSM99868 TCHW P11_ir29 salt stress, biological rep2 GSE4438 Expression data from rice under salinity stress
27.2 99.6 GSM99867 TCHW P10_ir29 salt stress, biological rep1 GSE4438 Expression data from rice under salinity stress
24.6 99.4 GSM99869 TCHW P12_ir29 salt stress, biological rep3 GSE4438 Expression data from rice under salinity stress
23.9 99.4 GSM67061 IR29 salt stressed replicate 2 GSE3053 Rice salt expression
21.2 99.2 GSM67060 IR29 salt stressed replicate 1 GSE3053 Rice salt expression
17.8 98.9 GSM99873 TCHW P16_agami salt stress, biological rep1 GSE4438 Expression data from rice under salinity stress
16.2 98.8 GSM67062 IR29 salt stressed replicate 3 GSE3053 Rice salt expression
15.4 98.7 GSM99874 TCHW P17_agami salt stress, biological rep2 GSE4438 Expression data from rice under salinity stress
15.0 98.6 GSM67057 FL478 salt stressed replicate 3 GSE3053 Rice salt expression
13.3 98.4 GSM67056 FL478 salt stressed replicate 2 GSE3053 Rice salt expression
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.74 0 1534 Os04g0120200 9632.m00205 - Proteinase inhibitor I9, subtilisin propeptidedomain containing protein 1e+0 At4g15040 identical protein binding / serine-type endopeptidase C.G. S.X.
0.47 2e-164 581 Os04g0126600 9632.m00281 - - 5e-1 At3g24120 myb family transcription factor C.G. S.X.
0.28 5e-69 264 Os04g0121300 CB627086 - Subtilase 2e-3 At4g21326 ATSBT3.12 (SUBTILASE 3.12) C.G. S.X.
0.21 1e-44 182 Os04g0121200 9632.m00215 - - 3e+0 At5g44460 calcium-binding protein, putative C.G. S.X.
0.05 2e-22 109 Os04g0126500 AK067465.1 - Hypothetical protein 6e-1 At5g43410 ethylene-responsive factor, putative C.G. S.X.
0.04 2e+0 34 Os09g0563800 AK068364.1 - Hypothetical protein 4e+0 At3g01830 calmodulin-related protein, putative C.G. S.X.
0.04 2e+0 34 Os11g0179933 9639.m00720 - - 3e+0 At2g34224 unknown protein C.G. S.X.
0.01 5e-1 36 Os02g0271600 9630.m01603 - Peptidase S8 and S53, subtilisin, kexin, sedolisindomain containing protein 4e+0 At4g10550 subtilase family protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 1e+0 36 Arabidopsis thaliana At4g15040 827163 identical protein binding / serine-type endopeptidase F:identical protein binding, serine-type endopeptidase activity;P:proteolysis, N-terminal protein myristoylation, negative regulation of catalytic activity;C:unknown;BPOFAM - - - C.G. S.X.
0.02 6e-3 44 Glycine max Gma.8457.1.S1_at AY033772.1 subtilisin-type protease precursor - 8e-5 At1g20160 ATSBT5.2 C.G. S.X.
0.01 2e+0 34 Hordeum vulgare Contig4887_s_at Contig4887 - - 8e-2 At2g45130 SPX3 (SPX DOMAIN GENE 3) C.G. S.X.
0.02 1e+0 36 Populus trichocarpa PtpAffx.224664.1.S1_at pmrna43429 hypothetical protein - 7e-8 At5g59130 subtilase family protein C.G. S.X.
0.10 3e-7 57 Triticum aestivum Ta.408.1.A1_at BG905348 - - 2e+0 At1g06500 unknown protein C.G. S.X.
0.01 5e+0 32 Vitis vinifera 1616499_at AY427126.1 - - 5e-1 At3g07760 - C.G. S.X.
0.01 2e+0 34 Zea mays Zm.1583.3.A1_x_at CF632245 hypothetical protein LOC100193619 /// hydrophobic protein LTI6A /// hydrophobic protein LTI6A - 1e+0 At5g24060 unknown protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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