Gene omics information

Query gene ID Os04g0107700
Gene name
Organism Oryza sativa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6382.7Os04g0107700AK110974.1-Peptidase C1A, papain family protein3e-3At3g19400cysteine proteinase, putativeS.X.H.G.
0.6079.7Os04g01962009632.m01071-O-methyltransferase, family 2 domain containingprotein1e-1At3g63410APG1 (ALBINO OR PALE GREEN MUTANT 1)S.X.H.G.
0.5068.0Os03g0404800AK099537.1-3-beta hydroxysteroid dehydrogenase/isomerasefamily protein4e-2At1g47290AT3BETAHSD/D1 (3BETA-HYDROXYSTEROID-DEHYDROGENASE/DECARBOXYLASE ISOFORM 1)S.X.H.G.
0.3134.5Os05g0365600CB096565-Hydroxyisourate hydrolase2e+0At3g60130BGLU16 (BETA GLUCOSIDASE 16)S.X.H.G.
0.3032.7Os06g01923009634.m00877--3e-1At1g64340unknown proteinS.X.H.G.
0.094.9Os11g0439600AK069955.1-Nod factor binding lectin-nucleotidephosphohydrolase2e-1At5g18280ATAPY2 (ARABIDOPSIS THALIANA APYRASE 2)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
57.399.9GSM387556Transgenic line 4, biological rep. 1GSE15448Glycinebetaine-induced water-stress tolerance in codA-expressing transgenic indica rice
30.699.7GSM116402Seedling_BAP treated_rep2GSE5167Rice seedling hormone treatment
28.099.6GSM116195Seedling_Control_rep1GSE5167Rice seedling hormone treatment
26.499.5GSM116401Seedling_BAP treated_rep1GSE5167Rice seedling hormone treatment
19.399.0GSM116399Seedling_IAA treated_rep1GSE5167Rice seedling hormone treatment
19.099.0GSM116398Seedling_Control_rep2GSE5167Rice seedling hormone treatment
16.998.8GSM116400Seedling_IAA treated_rep2GSE5167Rice seedling hormone treatment
12.398.3GSM1592607-day-old Seedling, biological rep 2GSE6901Expression data for stress treatment in rice seedlings
11.798.2GSM1592617-day-old Seedling, biological rep 3GSE6901Expression data for stress treatment in rice seedlings
10.498.1GSM302919leaf_rep2GSE11966Expression data from rice embryo,endosperm,root,leaf and seedling
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.056e-344Os01g0347600NM_183998.1-Ervatamin B (EC 3.4.22.-) (ERV-B)4e-2At1g29090peptidase C1A papain family proteinC.G.S.X.
0.039e-240Os12g04432009640.m02454--5e-1At1g20850XCP2 (xylem cysteine peptidase 2)C.G.S.X.
0.026e-344Os11g0255300AK071495.1-Peptidase C1A, papain family protein3e-3At4g23520cysteine proteinase, putativeC.G.S.X.
0.029e-240Os04g0450000AK108406.1-FYVE/PHD zinc finger domain containing protein8e+0At3g13677unknown proteinC.G.S.X.
0.029e-240Os06g01325009634.m00329-Alpha/beta hydrolase family protein1e-2At1g64670BDG1 (BODYGUARD1)C.G.S.X.
0.029e-240Os09g0497500AK072767.1-Peptidase C1A, papain family protein3e-3At2g27420cysteine proteinase, putativeC.G.S.X.
0.019e-240Os07g0540100AK101714.1-Receptor protein kinase1e-3At4g05200protein kinase family proteinC.G.S.X.
0.019e-240Os08g0178200AK070877.1-Monosaccharide transporter 33e-7At1g11260STP1 (SUGAR TRANSPORTER 1)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.033e-344Arabidopsis thalianaAt3g19400821474cysteine proteinase, putativeF:cysteine-type endopeptidase activity, cysteine-type peptidase activity;P:proteolysis;C:endomembrane system;MOPVBAF---C.G.S.X.
0.026e-550Glycine maxGma.12150.1.S1_atAB092557.1cysteine proteinase-5e-11At3g48340cysteine-type endopeptidase/ cysteine-type peptidaseC.G.S.X.
0.133e-23109Hordeum vulgareContig2988_s_atContig2988--2e-1At2g18670zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
0.036e-240Populus trichocarpaPtpAffx.151041.1.S1_s_atAJ780822hypothetical protein-3e-1At1g20850XCP2 (xylem cysteine peptidase 2)C.G.S.X.
0.144e-21103Triticum aestivumTa.1151.1.S1_atCD875153--2e-1At2g18670zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
0.032e-136Vitis vinifera1619968_atCF604378similar to cysteine protease Cp5-3e-2At3g19400cysteine proteinase, putativeC.G.S.X.
0.072e-550Zea maysZm.12475.1.S1_atAW600588--8e-1At3g54940-C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
LGO:0006527The chemical reactions and pathways resulting in the breakdown of arginine, 2-amino-5-(carbamimidamido)pentanoic acid.
LGO:0008295The chemical reactions and pathways resulting in the formation of spermidine, N-(3-aminopropyl)-1,4-diaminobutane.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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