CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os04g0103800

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.57 77.0 Os04g0103800 AK110629.1 - Conserved hypothetical protein 2e+0 At5g65480 unknown protein S.X. H.G.
0.60 79.7 Os10g0186800 9638.m00950 - Nucleic acid-binding OB-fold domain containingprotein 8e+0 At5g55940 emb2731 (embryo defective 2731) S.X. H.G.
0.44 58.1 Os03g0679800 AK060719.1 - TPR-like domain containing protein 2e-1 At2g23320 WRKY15 S.X. H.G.
0.10 5.7 Os01g0750100 AK067329.1 - WRKY transcription factor 31 1e-11 At3g58710 WRKY69 S.X. H.G.
0.07 3.7 Os01g0922700 9629.m06891 - Hypothetical protein 7e-2 At1g27760 interferon-related developmental regulator family protein / IFRD protein family S.X. H.G.
0.05 2.5 Os10g0498300 AK060338.1 - Epoxide hydrolase 2e+0 At5g59870 HTA6 S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
33.0 99.8 GSM207566 Mudanjiang8 wild type control rep2 GSE8380 Rice Gene Network Inferred from Expression Profiling of Plants Overexpressing OsWRKY13
28.2 99.6 GSM207567 Mudanjiang8 wild type control rep3 GSE8380 Rice Gene Network Inferred from Expression Profiling of Plants Overexpressing OsWRKY13
24.4 99.4 GSM207563 Mudanjiang8 OsWRKY13 Overexpressing D11UM7-2 rep2 GSE8380 Rice Gene Network Inferred from Expression Profiling of Plants Overexpressing OsWRKY13
24.0 99.4 GSM207565 Mudanjiang8 wild type control rep1 GSE8380 Rice Gene Network Inferred from Expression Profiling of Plants Overexpressing OsWRKY13
23.4 99.4 GSM207564 Mudanjiang8 OsWRKY13 Overexpressing D11UM7-2 rep3 GSE8380 Rice Gene Network Inferred from Expression Profiling of Plants Overexpressing OsWRKY13
22.1 99.3 GSM207560 Mudanjiang8 OsWRKY13 Overexpressing D11UM1-1 rep3 GSE8380 Rice Gene Network Inferred from Expression Profiling of Plants Overexpressing OsWRKY13
21.5 99.2 GSM207559 Mudanjiang8 OsWRKY13 Overexpressing D11UM1-1 rep2 GSE8380 Rice Gene Network Inferred from Expression Profiling of Plants Overexpressing OsWRKY13
21.0 99.2 GSM207562 Mudanjiang8 OsWRKY13 Overexpressing D11UM7-2 rep1 GSE8380 Rice Gene Network Inferred from Expression Profiling of Plants Overexpressing OsWRKY13
19.7 99.1 GSM387562 Wild-type, biological rep. 1 GSE15448 Glycinebetaine-induced water-stress tolerance in codA-expressing transgenic indica rice
18.5 99.0 GSM207558 Mudanjiang8 OsWRKY13 Overexpressing D11UM1-1 rep1 GSE8380 Rice Gene Network Inferred from Expression Profiling of Plants Overexpressing OsWRKY13
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.24 1e-33 145 Os04g0638200 AK100418.1 - Hypothetical protein 3e+0 At2g38270 CXIP2 (CAX-INTERACTING PROTEIN 2) C.G. S.X.
0.23 6e-11 69 Os12g0435100 AK107846.1 - Hypothetical protein 5e-1 At2g41200 unknown protein C.G. S.X.
0.05 2e-8 61 Os09g0415400 AK119737.1 - Conserved hypothetical protein 6e-1 At3g46030 HTB11 C.G. S.X.
0.04 2e-4 48 Os06g0254300 AK066241.1 - Caleosin related family protein 8e-3 At1g23240 caleosin-related family protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 2e+0 34 Arabidopsis thaliana At5g65480 836673 unknown protein F:molecular_function unknown;P:biological_process unknown;C:chloroplast;P - - - C.G. S.X.
0.03 6e-1 36 Glycine max GmaAffx.45372.1.S1_at AI737036 - - 2e-43 At2g47960 unknown protein C.G. S.X.
0.03 6e-2 38 Hordeum vulgare Contig4565_s_at Contig4565 - - 5e-7 At3g47300 SELT (SELT-LIKE PROTEIN PRECURSOR) C.G. S.X.
0.02 1e+1 32 Populus trichocarpa PtpAffx.221494.1.S1_at pmrna38401 hypothetical protein - 1e-32 At1g52500 ATMMH-1 (ARABIDOPSIS THALIANA MUTM HOMOLOG-1) C.G. S.X.
0.03 5e-1 36 Triticum aestivum TaAffx.84488.1.S1_at CA635774 - - 2e-2 At4g09320 NDPK1 C.G. S.X.
0.03 5e-1 34 Vitis vinifera 1615553_at CD800674 hypothetical protein LOC100261677 - 3e+0 At2g20690 lumazine-binding family protein C.G. S.X.
0.02 2e-1 36 Zea mays Zm.11927.1.A1_at BM381923 - - 1e+0 At4g31360 selenium binding C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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