CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os03g0859100

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.77 93.1 Os03g0859100 AK060992.1 - Lipolytic enzyme, G-D-S-L family protein 2e-1 At5g40630 ubiquitin family protein S.X. H.G.
0.55 73.7 Os09g0360500 AK105487.1 - Conserved hypothetical protein 1e-2 At5g48920 TED7 (TRACHEARY ELEMENT DIFFERENTIATION-RELATED 7) S.X. H.G.
0.44 58.1 Os01g0312500 AK105998.1 - Pectin methylesterase isoform alpha (EC 3.1.1.11)(Fragment) 2e-2 At3g14310 ATPME3 S.X. H.G.
0.44 58.1 Os11g0432600 AK059916.1 - Beta-ketoacyl reductase GL8B 3e+0 At4g31580 SRZ-22 S.X. H.G.
0.25 24.1 Os05g0518300 AK061147.1 - Lipolytic enzyme, G-D-S-L family protein 8e-4 At1g71691 GDSL-motif lipase/hydrolase family protein S.X. H.G.
0.13 8.2 Os09g0414500 AK058840.1 - ZF-HD homeobox protein 5e-3 At3g28917 MIF2 (MINI ZINC FINGER 2) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
59.1 99.9 GSM159172 Rice coleoptiles, 4 days old, aerobic, replicate N.1 (sample#9) GSE6908 Transcript Profiling of the Aerobic and Anoxic Rice Coleoptile
41.9 99.9 GSM159173 Rice coleoptiles, 4 days old, aerobic, replicate N.2 (sample#10) GSE6908 Transcript Profiling of the Aerobic and Anoxic Rice Coleoptile
11.8 98.3 GSM422676 Control GSE16865 Heterologous microarrays for the study of drought stress in Musa
10.4 98.1 GSM99860 TCHW P3_m103 control, biological rep3 GSE4438 Expression data from rice under salinity stress
9.8 98.0 GSM67062 IR29 salt stressed replicate 3 GSE3053 Rice salt expression
9.2 97.9 GSM99864 TCHW P7_ir29 control, biological rep1 GSE4438 Expression data from rice under salinity stress
8.9 97.8 GSM67060 IR29 salt stressed replicate 1 GSE3053 Rice salt expression
8.5 97.7 GSM99858 TCHW P1_m103 control, biological rep1 GSE4438 Expression data from rice under salinity stress
8.3 97.7 GSM67052 FL478 control replicate 1 GSE3053 Rice salt expression
8.0 97.6 GSM67054 FL478 control replicate 3 GSE3053 Rice salt expression
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.09 2e-6 56 Os10g0140300 AK100609.1 - Lipolytic enzyme, G-D-S-L family protein 4e-2 At2g30310 GDSL-motif lipase/hydrolase family protein C.G. S.X.
0.04 2e-8 61 Os09g0132900 AK059484.1 - Lipolytic enzyme, G-D-S-L family protein 1e-2 At2g42990 GDSL-motif lipase/hydrolase family protein C.G. S.X.
0.03 4e-13 77 Os10g0438600 AK065583.1 - Family II lipase EXL3 5e-2 At3g02910 - C.G. S.X.
0.03 7e-6 54 Os08g0112900 AK105876.1 - Lipolytic enzyme, G-D-S-L family protein 1e-2 At1g71691 GDSL-motif lipase/hydrolase family protein C.G. S.X.
0.02 2e-6 56 Os02g0101500 AK067642.1 - Hydroxypyruvate reductase (EC 1.1.1.29) 7e-49 At1g68010 HPR C.G. S.X.
0.02 2e-6 56 Os06g0636700 AK058562.1 - Lipolytic enzyme, G-D-S-L family protein 3e-3 At2g42990 GDSL-motif lipase/hydrolase family protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 2e-1 38 Arabidopsis thaliana At5g40630 834062 ubiquitin family protein F:molecular_function unknown;P:protein modification process;C:chloroplast;MPOBFV - - - C.G. S.X.
0.04 7e-2 40 Glycine max GmaAffx.87400.1.S1_at AI930678 - - 1e+0 At5g58680 armadillo/beta-catenin repeat family protein C.G. S.X.
0.04 4e-4 46 Hordeum vulgare Contig15331_at Contig15331 - - 1e-2 At2g42990 GDSL-motif lipase/hydrolase family protein C.G. S.X.
0.03 2e-5 52 Populus trichocarpa PtpAffx.120580.1.A1_a_at CV274759 - - 5e+0 At4g30510 AtATG18b C.G. S.X.
0.18 1e-18 95 Triticum aestivum TaAffx.78753.1.S1_at CA727770 - - 7e-2 At3g44950 glycine-rich protein C.G. S.X.
0.05 9e-1 34 Vitis vinifera 1617627_at CF568926 - - 8e-1 At5g67390 unknown protein C.G. S.X.
0.11 2e-30 133 Zea mays Zm.11995.1.A1_at BM382516 anther-specific proline-rich protein APG - 1e+0 At3g54680 proteophosphoglycan-related C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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