Gene omics information

Query gene ID Os03g0856000
Gene name
Organism Oryza sativa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.4458.1Os03g0856000AK071626.1-2OG-Fe(II) oxygenase domain containing protein8e-7At1g066502-oxoglutarate-dependent dioxygenase, putativeS.X.H.G.
0.6079.7Os09g0274900AK062419.1-Conserved hypothetical protein1e+0At1g05740unknown proteinS.X.H.G.
0.4051.1Os12g0263000AY453405.1-Glutathione synthetase4e-6At5g27380GSH2 (GLUTATHIONE SYNTHETASE 2)S.X.H.G.
0.3338.8Os08g0549000AK060276.1-Myb, DNA-binding domain containing protein2e+0At4g00200DNA bindingS.X.H.G.
0.1510.3Os02g0543000AK066415.1--1e-1At5g66400RAB18 (RESPONSIVE TO ABA 18)S.X.H.G.
0.105.7Os04g0616300CR290000-Protein kinase domain containing protein1e-3At1g56120kinaseS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
21.299.2GSM195226RootGSE7951Genome-wide gene expression profiling of rice stigma
9.397.9GSM302920root_rep1GSE11966Expression data from rice embryo,endosperm,root,leaf and seedling
8.097.6GSM431932Root- -Fe-P biological rep2GSE17245Transcriptome analysis of iron and phosphorus interaction in rice seedlings
8.097.6GSM431926Root- +Fe+P biological rep2GSE17245Transcriptome analysis of iron and phosphorus interaction in rice seedlings
7.797.6GSM431931Root- -Fe-P biological rep1GSE17245Transcriptome analysis of iron and phosphorus interaction in rice seedlings
7.697.5GSM149411Rice Bala 0ppm Arsenate (Control) Rep3GSE4471Expression data from rice varieties Azucena and Bala grown in 0 and 1ppm arsenate
7.497.5GSM304664Control for the stable mutant rice lineGSE12069Mycroarray analyses reveal that plant mutagenesis may induce more transcriptomic changes than transgene insertion
7.297.4GSM154940Root_DMSO-treatment_120min_replicate 2GSE6719Cytokinin responsive genes in rice
6.897.3GSM262021Nipponbare, 11 days after infection with S. hermonthica, biological replicate #2GSE10373Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica
6.697.3GSM304669Control for the stable mutant rice line (1)GSE12069Mycroarray analyses reveal that plant mutagenesis may induce more transcriptomic changes than transgene insertion
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.062e-346Os01g0935400NM_190055.1-2OG-Fe(II) oxygenase domain containing protein1e-1At3g21420oxidoreductase, 2OG-Fe(II) oxygenase family proteinC.G.S.X.
0.066e-344Os03g06905009631.m04713-2OG-Fe(II) oxygenase domain containing protein2e+0At2g254502-oxoglutarate-dependent dioxygenase, putativeC.G.S.X.
0.044e-757Os05g0127500AK068517.1-Leucoanthocyanidin dioxygenase-like protein8e-1At5g25220KNAT3 (KNOTTED1-LIKE HOMEOBOX GENE 3)C.G.S.X.
0.044e-448Os08g0390200AK068286.1-2-oxoglutarate-dependent oxygenase1e-2At1g63970ISPFC.G.S.X.
0.036e-344Os08g0249900BM419927-2OG-Fe(II) oxygenase domain containing protein2e-1At4g38401unknown proteinC.G.S.X.
0.016e-344Os01g0883800AY114310.1-Gibberellin 20-oxidase5e-8At4g25420GA20OX1C.G.S.X.
0.016e-344Os03g0201300AK101497.1-Hypothetical protein3e-1At1g63320pentatricopeptide (PPR) repeat-containing proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.028e-756Arabidopsis thalianaAt1g066508371752-oxoglutarate-dependent dioxygenase, putativeencodes a protein whose sequence is similar to 2-oxoglutarate-dependent dioxygenase---C.G.S.X.
0.021e+036Glycine maxPsAffx.psZS005xC05f_atPsAffx.psZS005xC05f--2e-2At1g02405proline-rich family proteinC.G.S.X.
0.031e-138Hordeum vulgareContig11699_atContig11699--2e-3At5g05600oxidoreductase, 2OG-Fe(II) oxygenase family proteinC.G.S.X.
0.042e-552Populus trichocarpaPtpAffx.208550.1.S1_atpmrna16966hypothetical protein-2e-12At3g21420oxidoreductase, 2OG-Fe(II) oxygenase family proteinC.G.S.X.
0.164e-43176Triticum aestivumTa.17821.1.S1_atCA624612--2e+1At5g05440unknown proteinC.G.S.X.
0.029e-134Vitis vinifera1622045_atCB004320hypothetical protein LOC100244255-3e-1At1g066402-oxoglutarate-dependent dioxygenase, putativeC.G.S.X.
0.085e-342Zea maysZm.2963.1.A1_atBG842411naringenin,2-oxoglutarate 3-dioxygenase-6e+0At2g14247Expressed proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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