CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os03g0849700

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 98.9 Os03g0849700 AK111868.1 - TPR-like domain containing protein 1e-1 At4g02750 pentatricopeptide (PPR) repeat-containing protein S.X. H.G.
0.60 79.7 Os07g0598300 AK122151.1 - SNF2-related domain containing protein 3e-11 At5g07810 SNF2 domain-containing protein / helicase domain-containing protein / HNH endonuclease domain-containing protein S.X. H.G.
0.50 68.0 Os03g0192800 AK110648.1 - Peptidase C19, ubiquitin carboxyl-terminalhydrolase 2 family protein 1e-5 At3g49600 UBP26 (UBIQUITIN-SPECIFIC PROTEASE 26) S.X. H.G.
0.50 68.0 Os04g0218600 AK103472.1 - Galactose-binding like domain containing protein 4e-1 At1g44085 glycine-rich protein S.X. H.G.
0.44 58.1 Os02g0772300 AK071492.1 - GCN5-related N-acetyltransferase domain containingprotein 3e+0 At5g49540 unknown protein S.X. H.G.
0.43 55.4 Os04g0528400 AK101159.1 - Hus1-like protein family protein 2e-8 At1g17840 WBC11 (WHITE-BROWN COMPLEX HOMOLOG PROTEIN 11) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
57.9 99.9 GSM422672 Drought GSE16865 Heterologous microarrays for the study of drought stress in Musa
30.1 99.7 GSM422676 Control GSE16865 Heterologous microarrays for the study of drought stress in Musa
24.8 99.5 GSM377075 Genomic DNA - 45 day old leaf sample - mutant g650 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
24.7 99.4 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
20.1 99.1 GSM377084 Genomic DNA - 45 day old leaf sample - mutant f1856 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
19.7 99.1 GSM377073 Genomic DNA - 45 day old leaf sample - mutant d2943 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
18.5 99.0 GSM377082 Genomic DNA - 45 day old leaf sample - mutant g9799 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
17.8 98.9 GSM377086 Genomic DNA - 45 day old leaf sample - IR64 wtcheck GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
17.6 98.9 GSM377072 Genomic DNA - 45 day old leaf sample - mutant d1137 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
16.2 98.8 GSM377077 Genomic DNA - 45 day old leaf sample - mutant g6489 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.07 4e-18 95 Os02g0105100 AK122164.1 - Hypothetical protein 2e-4 At5g47480 unknown protein C.G. S.X.
0.03 9e-10 67 Os12g0514600 AK073732.1 - Sterile alpha motif SAM domain containing protein 9e-18 At3g07760 - C.G. S.X.
0.02 6e-5 52 Os06g0105600 AK106556.1 - Hypothetical protein 3e-4 At5g47480 unknown protein C.G. S.X.
0.01 3e-3 46 Os09g0407800 AK105259.1 - TPR-like domain containing protein 8e-2 At1g76020 - C.G. S.X.
0.01 1e-1 40 Os02g0552100 AK100075.1 - TPR-like domain containing protein 2e+0 At5g06540 pentatricopeptide (PPR) repeat-containing protein C.G. S.X.
0.01 1e-1 40 Os12g0162900 9640.m00578 - Protein of unknown function DUF537 family protein 1e-1 At5g64710 unknown protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 7e-2 40 Arabidopsis thaliana At4g02750 828187 pentatricopeptide (PPR) repeat-containing protein F:unknown;P:unknown;C:mitochondrion;POMFB - - - C.G. S.X.
0.01 4e-1 38 Glycine max Gma.913.1.A1_at AW570445 - - 5e-2 At5g44340 TUB4 C.G. S.X.
0.01 3e-2 40 Hordeum vulgare Contig6817_at Contig6817 - - 2e-2 At3g56910 PSRP5 (PLASTID-SPECIFIC 50S RIBOSOMAL PROTEIN 5) C.G. S.X.
0.02 1e-1 40 Populus trichocarpa PtpAffx.224814.1.S1_at pmrna43680 hypothetical protein - 2e-4 At4g18750 DOT4 (DEFECTIVELY ORGANIZED TRIBUTARIES 4) C.G. S.X.
0.02 5e+0 34 Triticum aestivum TaAffx.100748.1.S1_at BG909506 - - 7e-1 At5g59970 histone H4 C.G. S.X.
0.01 3e-1 36 Vitis vinifera 1621485_at CB971472 hypothetical protein LOC100258793 - 2e-17 At2g40110 yippee family protein C.G. S.X.
0.01 2e+0 34 Zea mays Zm.12558.1.A1_at CN844494 hypothetical protein LOC100279818 - 7e-3 At1g80160 lactoylglutathione lyase family protein / glyoxalase I family protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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