Gene omics information

Query gene ID Os03g0842900
Gene name
Organism Oryza sativa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9198.9Os03g0842900AK107425.1-Short-chain dehydrogenase/reductase SDR familyprotein3e-3At3g47350short-chain dehydrogenase/reductase (SDR) family proteinS.X.H.G.
0.8395.8Os01g0728700AK108000.1-Conserved hypothetical protein3e-2At1g29680unknown proteinS.X.H.G.
0.6787.2Os01g0743500AY444338.1-NADP-dependent malic enzyme (EC 1.1.1.40)(NADP-ME)3e-47At5g11670ATNADP-ME2 (NADP-malic enzyme 2)S.X.H.G.
0.6382.7Os09g0433900AK107237.1-Alanine aminotransferase4e-3At1g72330ALAAT2 (ALANINE AMINOTRANSFERASE 2)S.X.H.G.
0.6181.2Os09g0127700AK107885.1-Conserved hypothetical protein1e+0At4g11660AT-HSFB2BS.X.H.G.
0.3440.0Os01g03033009629.m01932-Mitochondrial import inner membrane translocase,subunit Tim17/22 family protein5e-1At2g21660CCR2 (COLD, CIRCADIAN RHYTHM, AND RNA BINDING 2)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
114.8100.0GSM195228EmbryoGSE7951Genome-wide gene expression profiling of rice stigma
38.799.8GSM159220Seed (S5, 21 - 29 dap), biological rep 2GSE6893Expression data for reproductive development in rice
36.299.8GSM302914emb6D_rep1GSE11966Expression data from rice embryo,endosperm,root,leaf and seedling
34.199.8GSM302915emb6D_rep2GSE11966Expression data from rice embryo,endosperm,root,leaf and seedling
31.899.7GSM159218Seed (S4, 11 - 20 dap), biological rep 3GSE6893Expression data for reproductive development in rice
29.799.7GSM159221Seed (S5, 21 - 29 dap), biological rep 3GSE6893Expression data for reproductive development in rice
28.899.6GSM159216Seed (S4, 11 - 20 dap), biological rep 1GSE6893Expression data for reproductive development in rice
26.999.6GSM159219Seed (S5, 21 - 29 dap), biological rep 1GSE6893Expression data for reproductive development in rice
23.699.4GSM159217Seed (S4, 11 - 20 dap), biological rep 2GSE6893Expression data for reproductive development in rice
15.298.7GSM195229EndospermGSE7951Genome-wide gene expression profiling of rice stigma
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.093e-20101Os04g0390800AK108276.1-Short-chain dehydrogenase/reductase SDR familyprotein5e-8At3g47350short-chain dehydrogenase/reductase (SDR) family proteinC.G.S.X.
0.062e-861Os04g0390700AK107261.1-Short-chain dehydrogenase/reductase SDR familyprotein1e-2At5g50700short-chain dehydrogenase/reductase (SDR) family proteinC.G.S.X.
0.054e-1067Os02g0511400AK119471.1-Short-chain dehydrogenase/reductase SDR familyprotein2e-1At3g47350short-chain dehydrogenase/reductase (SDR) family proteinC.G.S.X.
0.056e-963Os11g0499600AK106189.1-Short-chain dehydrogenase/reductase SDR familyprotein1e-3At3g47350short-chain dehydrogenase/reductase (SDR) family proteinC.G.S.X.
0.032e-1275Os12g0464400AK121922.1-Short-chain dehydrogenase/reductase SDR familyprotein4e-2At5g50700short-chain dehydrogenase/reductase (SDR) family proteinC.G.S.X.
0.026e-344Os02g01900009630.m00886-ABC transporter-like protein1e-7At3g28345ABC transporter family proteinC.G.S.X.
0.016e-344Os07g0573000AK120026.1-Conserved hypothetical protein1e-3At5g46030unknown proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.043e-344Arabidopsis thalianaAt3g47350823889short-chain dehydrogenase/reductase (SDR) family proteinF:oxidoreductase activity, binding, catalytic activity;P:metabolic process;C:endomembrane system;BOMFPAV---C.G.S.X.
0.024e-344Glycine maxGma.15710.2.S1_atBM177372--2e-7At1g15980NDF1 (NDH-DEPENDENT CYCLIC ELECTRON FLOW 1)C.G.S.X.
0.093e-1479Hordeum vulgareContig11887_atContig11887--2e-6At3g47350short-chain dehydrogenase/reductase (SDR) family proteinC.G.S.X.
0.021e+036Populus trichocarpaPtpAffx.219558.1.S1_atpmrna35510hypothetical protein-4e+1At5g10890myosin heavy chain-relatedC.G.S.X.
0.069e-1065Triticum aestivumTa.5721.1.S1_atCD911583--3e-3At5g50690AtHSD7 (hydroxysteroid dehydrogenase 7)C.G.S.X.
0.036e-857Vitis vinifera1614670_atBQ796652hypothetical protein LOC100245367-7e-7At3g47360AtHSD3 (hydroxysteroid dehydrogenase 3)C.G.S.X.
0.073e-756Zea maysZm.9555.1.A1_atBM347835--1e-2At3g47350short-chain dehydrogenase/reductase (SDR) family proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
LGO:0008152The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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