CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os03g0833600

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 98.9 Os03g0833600 AK109880.1 - - 1e-3 At5g23950 C2 domain-containing protein S.X. H.G.
0.50 68.0 Os07g0570200 CB661872 - Peptidase M16, zinc-binding site containingprotein 1e-1 At3g57470 peptidase M16 family protein / insulinase family protein S.X. H.G.
0.50 68.0 Os12g0162100 AK062812.1 - MAP kinase-like protein 6e-8 At3g18750 WNK6 (WITH NO K (=LYSINE) 6) S.X. H.G.
0.46 60.9 Os01g0958500 AK072960.1 - RNA binding protein-like 1e-6 At1g78260 RNA recognition motif (RRM)-containing protein S.X. H.G.
0.25 24.1 Os01g0231800 AK062918.1 - Conserved hypothetical protein 2e+0 At3g16220 - S.X. H.G.
0.15 10.3 Os02g0196600 AK100988.1 - - 1e-10 At1g63440 HMA5 (HEAVY METAL ATPASE 5) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
26.5 99.5 GSM422672 Drought GSE16865 Heterologous microarrays for the study of drought stress in Musa
16.5 98.8 GSM154944 Root_tZ-treatment_120min_replicate 3 GSE6719 Cytokinin responsive genes in rice
12.3 98.3 GSM154942 Root_tZ-treatment_120min_replicate 1 GSE6719 Cytokinin responsive genes in rice
11.5 98.2 GSM149411 Rice Bala 0ppm Arsenate (Control) Rep3 GSE4471 Expression data from rice varieties Azucena and Bala grown in 0 and 1ppm arsenate
10.8 98.1 GSM154943 Root_tZ-treatment_120min_replicate 2 GSE6719 Cytokinin responsive genes in rice
8.0 97.6 GSM431929 Root- +Fe-P biological rep1 GSE17245 Transcriptome analysis of iron and phosphorus interaction in rice seedlings
7.9 97.6 GSM359917 IR63731 root, salt-treated, biological replicate 2 GSE14403 Root-specific transcriptional profiling of contrasting rice genotypes in response to salinity stress
7.9 97.6 GSM431930 Root- +Fe-P biological rep2 GSE17245 Transcriptome analysis of iron and phosphorus interaction in rice seedlings
7.6 97.5 GSM429984 Rice wild-type panicle rep2 GSE17194 Genome-wide gene expression profiling of rice Indica cultivar Zhongxian 3037 and mutant phoenix (pho) panicle
7.4 97.5 GSM154833 Root_tZ-treatment_30min_replicate 1 GSE6719 Cytokinin responsive genes in rice
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.33 0 1602 Os03g0833500 AK119356.1 - Conserved hypothetical protein 2e+0 Atmg00040 - C.G. S.X.
0.09 4e-11 71 Os01g0631500 AK063308.1 - Beta-1,3-glucanase-like protein 7e-4 At4g26830 catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds C.G. S.X.
0.06 6e-7 57 Os02g0771700 AK102185.1 - Glycoside hydrolase, family 17 protein 2e-2 At3g57260 BGL2 (BETA-1,3-GLUCANASE 2) C.G. S.X.
0.04 3e-5 52 Os06g0537700 AK109530.1 - Hypothetical protein 2e-3 At3g58100 PDCB5 (PLASMODESMATA CALLOSE-BINDING PROTEIN 5) C.G. S.X.
0.02 2e-6 56 Os03g0656800 AK069506.1 - Beta-1,3-glucanase-like protein 2e-1 At5g20870 glycosyl hydrolase family 17 protein C.G. S.X.
0.02 1e-4 50 Os03g0699400 AK069110.1 - N-acetyltransferase 5 (EC 2.3.1.-) 3e-27 At1g03150 GCN5-related N-acetyltransferase (GNAT) family protein C.G. S.X.
0.01 2e-6 56 Os03g0792800 9631.m05684 - Beta-1,3-glucanase-like protein 5e-3 At5g58090 glycosyl hydrolase family 17 protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 1e-3 46 Arabidopsis thaliana At5g23950 832460 C2 domain-containing protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OMFBPVA - - - C.G. S.X.
0.02 2e-3 46 Glycine max GmaAffx.17832.1.S1_at BG652873 - - 2e-4 At2g42280 basic helix-loop-helix (bHLH) family protein C.G. S.X.
0.03 5e-4 46 Hordeum vulgare Contig8262_at Contig8262 - - 2e-1 At3g15800 glycosyl hydrolase family 17 protein C.G. S.X.
0.02 1e-3 46 Populus trichocarpa PtpAffx.208494.1.S1_s_at pmrna16869 hypothetical protein - 4e-2 At5g61510 NADP-dependent oxidoreductase, putative C.G. S.X.
0.04 1e-3 46 Triticum aestivum TaAffx.84172.1.S1_at CA643336 - - 8e-1 At1g49140 NADH-ubiquinone oxidoreductase-related C.G. S.X.
0.02 1e+0 34 Vitis vinifera 1622186_at CF209012 hypothetical protein LOC100247647 - 4e+0 At3g50550 unknown protein C.G. S.X.
0.05 5e-4 46 Zea mays Zm.16907.2.S1_at CK371534 - - 1e+0 At5g44130 FLA13 (FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 13 PRECURSOR) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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