CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os03g0807100

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.71 89.6 Os03g0807100 CR283495 - Protein of unknown function DUF239 domaincontaining protein 2e-12 At1g55360 unknown protein S.X. H.G.
0.86 96.4 Os02g0200800 AB118005.1 - Targeting for Xklp2 family protein 6e-8 At4g32330 - S.X. H.G.
0.83 95.8 Os01g0195200 AK105501.1 - Serine/threonine-protein kinase PBS1 (EC 2.7.1.37)(AvrPphB susceptible protein 1) 3e-10 At2g20300 ALE2 (Abnormal Leaf Shape 2) S.X. H.G.
0.67 87.2 Os07g0501800 AK102299.1 - Hypothetical protein 3e-4 At1g28340 AtRLP4 (Receptor Like Protein 4) S.X. H.G.
0.61 81.2 Os03g0287700 AK058301.1 - Hypothetical protein 2e+0 At2g39820 eukaryotic translation initiation factor 6, putative / eIF-6, putative S.X. H.G.
0.57 77.0 Os03g0833800 AK066209.1 - Glycoside hydrolase, family 28 protein 1e-3 At3g62110 glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein S.X. H.G.
0.42 53.9 Os10g0497600 AK103003.1 - Protein kinase domain containing protein 1e-25 At3g59110 protein kinase family protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
10.1 98.0 GSM429984 Rice wild-type panicle rep2 GSE17194 Genome-wide gene expression profiling of rice Indica cultivar Zhongxian 3037 and mutant phoenix (pho) panicle
8.6 97.8 GSM159186 SAM, biological rep 1 GSE6893 Expression data for reproductive development in rice
8.4 97.7 GSM409427 Nipponbare_young panicle 2cm, biological rep3 GSE16265 SNEP: Simultaneous detection of nucleotide and expression polymorphisms using Affymetrix GeneChip
8.0 97.6 GSM429983 Rice mutant phoenix (pho) panicle rep1 GSE17194 Genome-wide gene expression profiling of rice Indica cultivar Zhongxian 3037 and mutant phoenix (pho) panicle
7.7 97.6 GSM159188 SAM, biological rep 3 GSE6893 Expression data for reproductive development in rice
7.2 97.4 GSM409434 9311_young panicle 2cm, biological rep5 GSE16265 SNEP: Simultaneous detection of nucleotide and expression polymorphisms using Affymetrix GeneChip
7.1 97.4 GSM429982 Rice wild-type panicle rep1 GSE17194 Genome-wide gene expression profiling of rice Indica cultivar Zhongxian 3037 and mutant phoenix (pho) panicle
7.1 97.4 GSM409430 9311_young panicle 2cm, biological rep1 GSE16265 SNEP: Simultaneous detection of nucleotide and expression polymorphisms using Affymetrix GeneChip
6.8 97.3 GSM409422 Nipponbare_young panicle 2cm, biological rep2 GSE16265 SNEP: Simultaneous detection of nucleotide and expression polymorphisms using Affymetrix GeneChip
6.7 97.3 GSM409428 Nipponbare_young panicle 2cm, biological rep4 GSE16265 SNEP: Simultaneous detection of nucleotide and expression polymorphisms using Affymetrix GeneChip
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.31 1e-117 424 Os07g0205500 AK103449.1 - Protein of unknown function DUF239 domaincontaining protein 8e-23 At3g13510 unknown protein C.G. S.X.
0.23 1e-49 198 Os07g0573400 AK121705.1 - Protein of unknown function DUF239 domaincontaining protein 8e-42 At3g13510 unknown protein C.G. S.X.
0.04 7e-5 50 Os08g0566100 AK107465.1 - Protein of unknown function DUF239 domaincontaining protein 5e-2 At5g18460 unknown protein C.G. S.X.
0.02 7e-2 40 Os01g0584100 AK109126.1 - Hypothetical protein 1e-1 At1g70895 CLE17 (CLAVATA3/ESR-RELATED 17) C.G. S.X.
0.01 7e-2 40 Os02g0797300 AK121272.1 - Plasma membrane H+-ATPase (Fragment) 5e-13 At3g42640 AHA8 (Arabidopsis H(+)-ATPase 8) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.14 2e-12 73 Arabidopsis thaliana At1g55360 841982 unknown protein F:unknown;P:biological_process unknown;C:endomembrane system;PFB - - - C.G. S.X.
0.08 3e-6 54 Glycine max Gma.2172.2.S1_a_at BI426425 - - 1e-145 At1g55360 unknown protein C.G. S.X.
0.39 1e-95 349 Hordeum vulgare Contig5274_s_at Contig5274 - - 7e-12 At3g13510 unknown protein C.G. S.X.
0.21 2e-25 117 Populus trichocarpa PtpAffx.8523.1.S1_at CV239620 hypothetical protein - 9e-106 At1g55360 unknown protein C.G. S.X.
0.43 4e-82 305 Triticum aestivum Ta.7595.1.A1_at BJ261301 - - 5e-4 At3g13510 unknown protein C.G. S.X.
0.16 2e-22 105 Vitis vinifera 1620804_at CD797824 hypothetical protein LOC100267227 - 3e-114 At1g55360 unknown protein C.G. S.X.
0.32 3e-121 434 Zea mays Zm.18312.1.S1_at CK827776 hypothetical protein LOC100279515 - 7e-17 At3g13510 unknown protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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