CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os03g0805900

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.73 91.1 Os03g0805900 9631.m05819 - Rieske [2Fe-2S] region domain containing protein 3e+0 At4g39360 unknown protein S.X. H.G.
0.15 10.3 Os03g0123000 NM_194854.1 - - 9e-2 At4g34170 kelch repeat-containing F-box family protein S.X. H.G.
0.09 4.9 Os12g0435200 AK120176.1 - Zeaxanthin cleavage oxygenase 2e-1 At5g48290 heavy-metal-associated domain-containing protein S.X. H.G.
0.01 0.5 Os03g0789900 AK106804.1 - Conserved hypothetical protein 4e-3 At2g43060 transcription factor S.X. H.G.
0.01 0.5 Os09g0329200 9637.m01335 - UDP-glucuronosyl/UDP-glucosyltransferase familyprotein 7e-1 At5g63480 unknown protein S.X. H.G.
0.00 0.1 Os07g0194400 AK067485.1 - Conserved hypothetical protein 3e-1 At3g28455 CLE25 (CLAVATA3/ESR-RELATED 25) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
39.8 99.9 GSM422674 Musa_DNA_RICE GSE16865 Heterologous microarrays for the study of drought stress in Musa
26.3 99.5 GSM99864 TCHW P7_ir29 control, biological rep1 GSE4438 Expression data from rice under salinity stress
24.8 99.5 GSM67062 IR29 salt stressed replicate 3 GSE3053 Rice salt expression
23.7 99.4 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
23.6 99.4 GSM377084 Genomic DNA - 45 day old leaf sample - mutant f1856 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
23.4 99.4 GSM377075 Genomic DNA - 45 day old leaf sample - mutant g650 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
19.0 99.0 GSM67060 IR29 salt stressed replicate 1 GSE3053 Rice salt expression
18.4 99.0 GSM99865 TCHW P8_ir29 control, biological rep2 GSE4438 Expression data from rice under salinity stress
17.6 98.9 GSM377078 Genomic DNA - 45 day old leaf sample - mutant g6603 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
16.8 98.8 GSM377071 Genomic DNA - 45 day old leaf sample - mutant d256 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.66 0 716 Os03g0805800 9631.m05818 - Rieske [2Fe-2S] region domain containing protein 9e-4 At4g25650 ACD1-LIKE (ACD1-LIKE) C.G. S.X.
0.61 3e-168 593 Os03g0805700 9631.m05817 - Rieske [2Fe-2S] region domain containing protein 2e-4 At4g25650 ACD1-LIKE (ACD1-LIKE) C.G. S.X.
0.53 1e-136 488 Os03g0805600 CB661394 - Rieske [2Fe-2S] region domain containing protein 1e-6 At4g25650 ACD1-LIKE (ACD1-LIKE) C.G. S.X.
0.02 2e-3 46 Os12g0565375 9640.m03672 - - 1e+1 At4g13600 - C.G. S.X.
0.02 6e-3 44 Os02g0510600 AK073949.1 - Heavy metal transport/detoxification proteindomain containing protein 5e-2 At5g23760 heavy-metal-associated domain-containing protein C.G. S.X.
0.02 3e-2 42 Os04g0605100 AK072938.1 - WRKY transcription factor 68 7e-22 At4g31550 WRKY11 C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 3e+0 34 Arabidopsis thaliana At4g39360 830091 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P - - - C.G. S.X.
0.02 1e+0 36 Glycine max HgAffx.6295.1.S1_at CB825916 - - 1e+0 At1g08480 unknown protein C.G. S.X.
0.26 2e-46 186 Hordeum vulgare Contig4782_s_at Contig4782 - - 4e-1 At5g11950 protein homodimerization C.G. S.X.
0.01 1e+0 36 Populus trichocarpa PtpAffx.130008.2.S1_at CB240267 hypothetical protein - 2e-33 At5g26110 ATP binding / catalytic/ protein kinase C.G. S.X.
0.32 6e-82 305 Triticum aestivum TaAffx.67544.1.S1_at CA713855 - - 2e-3 At4g25650 ACD1-LIKE (ACD1-LIKE) C.G. S.X.
0.02 6e-2 38 Vitis vinifera 1614720_at CD719089 hypothetical protein LOC100263831 - 1e-44 At4g25650 ACD1-LIKE (ACD1-LIKE) C.G. S.X.
0.02 9e-2 38 Zea mays Zm.9661.1.A1_at BM335503 - - 4e+0 At5g04470 SIM (SIAMESE) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
L GO:0022900 A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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