Gene omics information

Query gene ID Os03g0786800
Gene name
Organism Oryza sativa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9198.9Os03g0786800AK059186.1-The start codon is not identified.4e-54At5g46210CUL4 (CULLIN4)S.X.H.G.
0.7391.1Os01g0585700NM_192531.1-SIT4 phosphatase-associated protein family protein2e-17At1g30470SIT4 phosphatase-associated family proteinS.X.H.G.
0.6079.7Os09g0281600AK067020.1-SWAP/Surp domain containing protein6e-12At3g52120SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / D111/G-patch domain-containing proteinS.X.H.G.
0.5676.3Os03g0750800AK061386.1-Transcriptional adaptor ADA2b (AT4g16420/dl4235c)9e-11At4g16420ADA2B (HOMOLOG OF YEAST ADA2 2B)S.X.H.G.
0.4762.3Os11g0661400AK063910.1-AAA ATPase, central region domain containingprotein9e-37At1g02890AAA-type ATPase family proteinS.X.H.G.
0.3846.9Os07g0495900AK060293.1-Regulator of nonsense transcripts 1 homolog1e-6At5g47010LBA1 (LOW-LEVEL BETA-AMYLASE 1)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
4.196.0GSM35713314-day-old seedling, rep 2GSE14275Expression data for heat shock in rice seedlings
3.795.6GSM173091Rice OsSRT1 RNAi transgenic line LM1GSE7197Down-regulation of OsSRT1 induces DNA ´╗┐fragmentation and cell death in rice
3.294.9GSM159183Y Leaf, biological rep 1GSE6893Expression data for reproductive development in rice
3.194.8GSM159185Y Leaf, biological rep 3GSE6893Expression data for reproductive development in rice
2.994.5GSM159186SAM, biological rep 1GSE6893Expression data for reproductive development in rice
2.994.5GSM149412Rice Bala 1ppm Arsenate Rep3GSE4471Expression data from rice varieties Azucena and Bala grown in 0 and 1ppm arsenate
2.894.3GSM159187SAM, biological rep 2GSE6893Expression data for reproductive development in rice
2.794.1GSM195223Ovary 3, biological rep 3GSE7951Genome-wide gene expression profiling of rice stigma
2.794.1GSM195222Ovary 2, biological rep 2GSE7951Genome-wide gene expression profiling of rice stigma
2.794.1GSM302923seedling_rep2GSE11966Expression data from rice embryo,endosperm,root,leaf and seedling
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.022e-242Os04g0643000AK069061.1-Cullin family protein1e-19At1g26830ATCUL3 (ARABIDOPSIS THALIANA CULLIN 3)C.G.S.X.
0.011e+036Os07g0173200AK098899.1-Conserved hypothetical protein3e-1At5g60840unknown proteinC.G.S.X.
0.014e+034Os01g0857000AK119434.1-Double-stranded RNA binding domain containingprotein6e-15At5g01270CPL2C.G.S.X.
0.014e+034Os05g0462500AK064348.1-Lung seven transmembrane receptor family protein2e-4At5g18520-C.G.S.X.
0.014e+034Os11g0103800AK073546.1-Hypothetical protein1e+0At3g26690ATNUDX13 (ARABIDOPSIS THALIANA NUDIX HYDROLASE HOMOLOG 13)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.254e-54212Arabidopsis thalianaAt5g46210834663CUL4 (CULLIN4)Arabidopsis CULLIN4 (CUL4) forms an E3 ubiquitin ligase with the CDD complex and a common catalytic subunit RBX1 in mediating light control of development. This CUL4-based E3 ligase is essential for the repression of photomorphogenesis. The partial loss of CUL4 function resulted in a constitutive photomorphogenic phenotype with respect to morphogenesis and light-regulated gene expression. CUL4 exhibits a synergistic genetic interaction with COP10 and DET1.---C.G.S.X.
0.587e-66252Glycine maxGma.6307.1.S1_atCD406411--4e-110At5g46210CUL4 (CULLIN4)C.G.S.X.
0.7601005Hordeum vulgareContig5473_atContig5473--6e-47At5g46210CUL4 (CULLIN4)C.G.S.X.
0.521e-94347Populus trichocarpaPtp.1438.1.S1_atCK093536--4e-141At5g46210CUL4 (CULLIN4)C.G.S.X.
0.600975Triticum aestivumTa.14271.1.S1_atBQ838640--3e-34At5g46210CUL4 (CULLIN4)C.G.S.X.
0.084e-857Vitis vinifera1619768_atCB003377--1e-7At5g46210CUL4 (CULLIN4)C.G.S.X.
0.550977Zea maysZm.5222.1.A1_a_atCA404656hypothetical protein LOC100192843-1e-55At5g46210CUL4 (CULLIN4)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
LGO:0007049The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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