CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os03g0784100

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.53 71.3 Os03g0784100 9631.m05600 - Patatin family protein 3e-3 At4g29800 PLP8 (PATATIN-LIKE PROTEIN 8) S.X. H.G.
0.10 5.7 Os05g0437800 AK106328.1 - Conserved hypothetical protein 4e-4 At1g73230 nascent polypeptide-associated complex (NAC) domain-containing protein S.X. H.G.
0.09 4.9 Os05g0410800 AK108312.1 - Conserved hypothetical protein 1e+0 At4g32340 - S.X. H.G.
0.03 1.4 Os01g0174000 9629.m00723 - Protein HY5 (AtbZIP56) 1e-3 At5g11260 HY5 (ELONGATED HYPOCOTYL 5) S.X. H.G.
0.03 1.4 Os06g0687600 CF196060 - Uncharacterized plant-specific domain 01627containing protein 8e+0 At5g06265 hyaluronan mediated motility receptor-related S.X. H.G.
0.02 1.0 Os11g0294800 AK109559.1 - Resistance protein candidate (Fragment) 5e-2 At1g70895 CLE17 (CLAVATA3/ESR-RELATED 17) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
54.9 99.9 GSM422674 Musa_DNA_RICE GSE16865 Heterologous microarrays for the study of drought stress in Musa
23.5 99.4 GSM377078 Genomic DNA - 45 day old leaf sample - mutant g6603 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
19.9 99.1 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
19.3 99.0 GSM377071 Genomic DNA - 45 day old leaf sample - mutant d256 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
19.0 99.0 GSM377081 Genomic DNA - 45 day old leaf sample - mutant g7534 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
18.2 98.9 GSM377080 Genomic DNA - 45 day old leaf sample - mutant g6728 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
18.0 98.9 GSM377076 Genomic DNA - 45 day old leaf sample - mutant g6485 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
17.5 98.9 GSM377077 Genomic DNA - 45 day old leaf sample - mutant g6489 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
17.2 98.8 GSM377085 Genomic DNA - 45 day old leaf sample - mutant f2045 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
15.8 98.7 GSM377086 Genomic DNA - 45 day old leaf sample - IR64 wtcheck GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.27 2e-27 125 Os12g0611300 9640.m04090 - Patatin family protein 7e-4 At3g54950 PLA IIIA (PATATIN-LIKE PROTEIN 6) C.G. S.X.
0.26 6e-15 83 Os03g0640000 9631.m04234 - Patatin family protein 4e-2 At4g29800 PLP8 (PATATIN-LIKE PROTEIN 8) C.G. S.X.
0.20 4e-16 87 Os06g0677000 9634.m04507 - Patatin family protein 2e+0 At5g22880 HTB2 C.G. S.X.
0.01 1e-3 46 Os03g0758900 AY341852.1 - WRKY transcription factor 34 7e-6 At5g07100 WRKY26 C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 3e-3 44 Arabidopsis thaliana At4g29800 829102 PLP8 (PATATIN-LIKE PROTEIN 8) F:unknown;P:metabolic process, lipid metabolic process;C:cellular_component unknown;PBOFM - - - C.G. S.X.
0.09 2e-1 38 Glycine max GmaAffx.28539.1.S1_at BQ080184 - - 8e-4 At3g63200 PLP9 (PATATIN-LIKE PROTEIN 9) C.G. S.X.
0.18 8e-39 161 Hordeum vulgare HR01F11u_at HR01F11u - - 3e+0 At3g10760 myb family transcription factor C.G. S.X.
0.02 4e-3 44 Populus trichocarpa PtpAffx.216880.1.S1_at pmrna31926 hypothetical protein - 6e+0 At3g46320 histone H4 C.G. S.X.
0.15 4e-18 93 Triticum aestivum Ta.25276.1.A1_at CD454889 - - 3e-5 At3g54950 PLA IIIA (PATATIN-LIKE PROTEIN 6) C.G. S.X.
0.06 6e-14 77 Vitis vinifera 1621427_at CF415676 hypothetical protein LOC100252820 - 4e-1 At1g06923 - C.G. S.X.
0.02 7e-2 38 Zea mays Zm.11658.1.A1_at CF349271 - - 7e+0 At4g34720 AVA-P1 C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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