CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os03g0774200

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.58 77.0 Os03g0774200 AK119532.1 - NADH-ubiquinone oxidoreductase subunit 8 (EC1.6.5.3) 2e-71 At1g79010 NADH-ubiquinone oxidoreductase 23 kDa subunit, mitochondrial (TYKY) S.X. H.G.
0.76 92.2 Os04g0398500 AK059519.1 - Ubiquinol-cytochrome c reductase iron-sulfursubunit, mitochondrial precursor (EC 1.10.2.2) (Rieskeiron-sulfur protein) (RISP) 7e-10 At5g13430 ubiquinol-cytochrome C reductase iron-sulfur subunit, mitochondrial, putative / Rieske iron-sulfur protein, putative S.X. H.G.
0.76 92.2 Os03g0390400 AB025187.1 - Cytochrome c oxidase subunit 6b (OSJNBa0029H02.1protein) (OSJNBa0067K08.22 protein) 7e-37 At1g22450 COX6B (CYTOCHROME C OXIDASE 6B) S.X. H.G.
0.75 91.9 Os07g0585800 AK105064.1 - NADH-ubiquinone oxidoreductase 18 kDa subunit (EC1.6.5.3) (EC 1.6.99.3) (Complex I-18KD) (CI-18KD)(Fragment) 7e-9 At5g67590 FRO1 (FROSTBITE1) S.X. H.G.
0.71 89.6 Os12g0169700 AK103904.1 - Ferripyochelin-binding protein-like 8e-16 At1g19580 GAMMA CA1 (GAMMA CARBONIC ANHYDRASE 1) S.X. H.G.
0.67 87.2 Os04g0418000 AK106155.1 - Conserved hypothetical protein 6e-1 At1g47420 - S.X. H.G.
0.67 87.2 Os07g0222800 AK100823.1 - Acyl carrier protein, mitochondrial precursor(ACP) (NADH-ubiquinone oxidoreductase 9.6 kDa subunit)(MtACP-1) 1e-1 At2g44620 MTACP-1 (MITOCHONDRIAL ACYL CARRIER PROTEIN 1) S.X. H.G.
0.64 83.4 Os05g0301700 AK070578.1 - Cytochrome c1 (Fragment) 5e-79 At3g27240 cytochrome c1, putative S.X. H.G.
0.63 82.7 Os05g0553000 AK071143.1 - ATP synthase beta chain, mitochondrial precursor(EC 3.6.3.14) 0 At5g08670 ATP binding / hydrogen ion transporting ATP synthase, rotational mechanism S.X. H.G.
0.60 79.7 Os03g0713400 AK058713.1 - NADH-ubiquinone oxidoreductase 75 kDa subunit,mitochondrial precursor (EC 1.6.5.3) (EC 1.6.99.3)(Complex I-75KD) (CI-75KD) (76 kDa mitochondrial complexI subunit) 7e-92 At5g37510 EMB1467 (embryo defective 1467) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
3.1 94.8 GSM275410 Bala root tip_At the wax layer_rep3 GSE10857 Gene expression of rice root tips before, at and buckled by a hard layer in two rice varieties
3.1 94.8 GSM275407 Azucena root tip_At the wax layer_rep3 GSE10857 Gene expression of rice root tips before, at and buckled by a hard layer in two rice varieties
3.0 94.6 GSM275409 Bala root tip_At the wax layer_rep2 GSE10857 Gene expression of rice root tips before, at and buckled by a hard layer in two rice varieties
2.9 94.5 GSM67059 IR29 control replicate 2 GSE3053 Rice salt expression
2.9 94.5 GSM275415 Azucena root tip_Before the wax layer_Rep2 GSE10857 Gene expression of rice root tips before, at and buckled by a hard layer in two rice varieties
2.8 94.3 GSM275413 Azucena root tip_Buckled at the wax layer_rep3 GSE10857 Gene expression of rice root tips before, at and buckled by a hard layer in two rice varieties
2.8 94.3 GSM100441 Rice Azucena 1ppm Arsenate Rep1 GSE4471 Expression data from rice varieties Azucena and Bala grown in 0 and 1ppm arsenate
2.8 94.3 GSM67056 FL478 salt stressed replicate 2 GSE3053 Rice salt expression
2.7 94.1 GSM275416 Azucena root tip_Before the wax layer_Rep3 GSE10857 Gene expression of rice root tips before, at and buckled by a hard layer in two rice varieties
2.7 94.1 GSM67058 IR29 control replicate 1 GSE3053 Rice salt expression
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 3e-4 48 Os08g0550000 AU174603 - Conserved hypothetical protein 6e-1 At2g17787 unknown protein C.G. S.X.
0.02 1e-3 46 Os02g0148500 AK068931.1 - Zn-finger, GATA type domain containing protein 1e-14 At3g21175 ZML1 (ZIM-LIKE 1) C.G. S.X.
0.02 4e-3 44 Os01g0273500 AK069401.1 - Heat shock protein DnaJ, N-terminal domaincontaining protein 1e-8 At2g41520 DNAJ heat shock N-terminal domain-containing protein C.G. S.X.
0.02 4e-3 44 Os02g0152600 AK073007.1 - Conserved hypothetical protein 1e-5 At1g53760 unknown protein C.G. S.X.
0.01 3e-4 48 Os06g0568200 AF375052.1 - Vacuolar ATPase B subunit 4e-111 At1g20260 hydrogen ion transporting ATP synthase, rotational mechanism / hydrolase, acting on acid anhydrides, catalyzing transmembrane movement of substances / proton-transporting ATPase, rotational mechanism C.G. S.X.
0.01 4e-3 44 Os02g0822500 AK065905.1 - Junctophilin 2 (Junctophilin type 2) (JP-2) 5e-41 At3g09920 PIP5K9 (PHOSPHATIDYL INOSITOL MONOPHOSPHATE 5 KINASE) C.G. S.X.
0.01 4e-3 44 Os05g0295300 AK059261.1 - Acetyl-coenzyme A carboxylase (EC 6.4.1.2) 2e+0 At3g24280 SMAP2 (small acidic protein 2) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.44 2e-71 270 Arabidopsis thaliana At1g79010 844242 NADH-ubiquinone oxidoreductase 23 kDa subunit, mitochondrial (TYKY) F:NADH dehydrogenase (ubiquinone) activity, metal ion binding;P:unknown;C:mitochondrion, respiratory chain complex I;BOAPMF - - - C.G. S.X.
0.35 2e-47 190 Glycine max Gma.4918.1.S1_at CA819981 - - 1e-88 At1g16700 NADH-ubiquinone oxidoreductase 23 kDa subunit, mitochondrial, putative C.G. S.X.
0.61 0 694 Hordeum vulgare Contig3664_at Contig3664 - - 1e-66 At1g79010 NADH-ubiquinone oxidoreductase 23 kDa subunit, mitochondrial (TYKY) C.G. S.X.
0.37 1e-48 194 Populus trichocarpa Ptp.1998.1.S1_at CK088912 hypothetical protein - 2e-108 At1g16700 NADH-ubiquinone oxidoreductase 23 kDa subunit, mitochondrial, putative C.G. S.X.
0.54 0 656 Triticum aestivum Ta.9617.1.S1_at CD871450 - - 8e-50 At1g16700 NADH-ubiquinone oxidoreductase 23 kDa subunit, mitochondrial, putative C.G. S.X.
0.33 2e-62 238 Vitis vinifera 1620631_at CB339382 hypothetical protein LOC100255601 - 1e-63 At1g16700 NADH-ubiquinone oxidoreductase 23 kDa subunit, mitochondrial, putative C.G. S.X.
0.55 1e-172 605 Zea mays Zm.14014.1.A1_at CF050089 NADH-ubiquinone oxidoreductase 23 kDa subunit - 2e-62 At1g79010 NADH-ubiquinone oxidoreductase 23 kDa subunit, mitochondrial (TYKY) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
L GO:0022900 A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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