Gene omics information

Query gene ID	Os03g0761100
Gene name
Organism	Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.67	87.2	Os03g0761100	AK066083.1	-	Protein phosphatase 2C-like protein	6e-8	At4g33920	protein phosphatase 2C family protein / PP2C family protein	S.X.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.73	91.1	Os04g0543500	9632.m04421	-	Homeodomain-like containing protein	2e+0	At2g44730	transcription factor	S.X.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.67	87.2	Os09g0486500	AF140722.2	-	Multiple stress-responsive zinc-finger protein(Multiple stress- associated zinc-finger protein)	2e+0	At5g24290	integral membrane family protein	S.X.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.61	81.2	Os05g0497300	AK111755.1	-	Ethylene responsive element binding factor 5(AtERF5)	4e-14	At3g15210	ERF4 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 4)	S.X.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.31	34.5	Os01g0908700	AK120427.1	-	Heterogeneous nuclear ribonucleoprotein A2 homolog1 (hnRNP A2(A))	2e-17	At1g67800	copine-related	S.X.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.30	32.7	Os04g0584600	AB042550.1	-	Calcium dependent protein kinase	3e-44	At2g17290	CPK6 (CALCIUM-DEPENDENT PROTEIN KINASE 6)	S.X.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
9.0	97.8	GSM159191	Young inflorescence (P1, upto 3 cm), biological rep 3	GSE6893	Expression data for reproductive development in rice
8.2	97.7	GSM159207	Seed (S1, 0 - 2 dap), biological rep 1	GSE6893	Expression data for reproductive development in rice
7.8	97.6	GSM159189	Young inflorescence (P1, upto 3 cm), biological rep 1	GSE6893	Expression data for reproductive development in rice
7.5	97.5	GSM278844	WuYun3-RSV infected, biological rep1	GSE11025	Comparative transcriptional profiling of two contrasting rice genotypes in response to rice stripe virus infection
7.3	97.5	GSM159180	Mature leaf, biological rep 1	GSE6893	Expression data for reproductive development in rice
7.2	97.4	GSM278852	KT95-418-RSV infected, biological rep3	GSE11025	Comparative transcriptional profiling of two contrasting rice genotypes in response to rice stripe virus infection
7.1	97.4	GSM278850	KT95-418-RSV infected, biological rep1	GSE11025	Comparative transcriptional profiling of two contrasting rice genotypes in response to rice stripe virus infection
6.8	97.3	GSM159182	Mature leaf, biological rep 3	GSE6893	Expression data for reproductive development in rice
6.7	97.3	GSM159198	Inflorescence (P4, 10 - 15 cm), biological rep 1	GSE6893	Expression data for reproductive development in rice
6.6	97.3	GSM278845	WuYun3-RSV infected, biological rep2	GSE11025	Comparative transcriptional profiling of two contrasting rice genotypes in response to rice stripe virus infection

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.37	5e-152	539	Os03g0104100	AK099959.1	-	Protein phosphatase 2C-like domain containingprotein	7e-5	At4g33920	protein phosphatase 2C family protein / PP2C family protein	C.G.	S.X.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.27	1e-38	163	Os07g0114000	AK102668.1	-	Protein phosphatase 2C-like	2e-1	At2g40380	PRA1.B2 (PRENYLATED RAB ACCEPTOR 1.B2)	C.G.	S.X.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.11	3e-14	81	Os03g0207400	AK072292.1	-	Protein phosphatase 2C-like domain containingprotein	6e-5	At5g66080	protein phosphatase 2C family protein / PP2C family protein	C.G.	S.X.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.11	3e-8	61	Os12g0580900	AK071206.1	-	Protein phosphatase 2C-like protein	3e-10	At4g33920	protein phosphatase 2C family protein / PP2C family protein	C.G.	S.X.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.06	3e-5	52	Os06g0525300	9634.m03131	-	-	3e+0	At5g11340	GCN5-related N-acetyltransferase (GNAT) family protein	C.G.	S.X.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.04	5e-7	57	Os07g0448900	NM_187121.1	-	-	7e-1	At5g48890	transcription factor	C.G.	S.X.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.06	6e-8	59	Arabidopsis thaliana	At4g33920	829536	protein phosphatase 2C family protein / PP2C family protein	F:protein serine/threonine phosphatase activity, catalytic activity;P:protein amino acid dephosphorylation;C:mitochondrion, protein serine/threonine phosphatase complex;PMOFBV	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.03	8e-2	40	Glycine max	GmaAffx.60441.1.S1_at	AW203611	-	-	3e-1	At3g62650	unknown protein	C.G.	S.X.	Please select
0.32	3e-39	163	Hordeum vulgare	Contig8551_at	Contig8551	-	-	8e-3	At3g55050	serine/threonine protein phosphatase 2C (PP2C6)	C.G.	S.X.	Please select
0.06	6e-9	63	Populus trichocarpa	PtpAffx.104155.1.S1_at	DN490322	hypothetical protein	-	2e-23	At4g33920	protein phosphatase 2C family protein / PP2C family protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.49	9e-69	262	Triticum aestivum	Ta.29444.2.S1_a_at	CA684925	-	-	4e-2	At3g55050	serine/threonine protein phosphatase 2C (PP2C6)	C.G.	S.X.	Please select
0.03	4e+0	32	Vitis vinifera	1618908_at	CB834387	-	-	4e-4	At3g17090	protein phosphatase 2C family protein / PP2C family protein	C.G.	S.X.	Please select
0.25	5e-53	208	Zea mays	Zm.18251.1.A1_at	CN845321	-	-	5e-3	At5g66080	protein phosphatase 2C family protein / PP2C family protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name
C	GO:0006470	The process of removing one or more phosphoric residues from a protein.

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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