CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os03g0751100

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 98.9 Os03g0751100 BU673383 - - 5e-28 At4g16370 ATOPT3 (OLIGOPEPTIDE TRANSPORTER) S.X. H.G.
0.80 94.6 Os07g0258400 AK103557.1 - Metal transporter Nramp6 (AtNramp6) 2e-8 At1g80830 NRAMP1 (NATURAL RESISTANCE-ASSOCIATED MACROPHAGE PROTEIN 1) S.X. H.G.
0.71 89.6 Os12g0282000 AK103636.1 - Hypothetical protein 8e+0 At5g63634 unknown protein S.X. H.G.
0.67 87.2 Os03g0379300 AK068704.1 - - 1e-1 At4g26940 galactosyltransferase family protein S.X. H.G.
0.60 79.7 Os11g0262600 AB053296.1 - Hypothetical protein 2e+0 At3g49120 PRXCB (PEROXIDASE CB) S.X. H.G.
0.55 73.7 Os01g0655500 AK120660.1 - Protein kinase domain containing protein 1e-10 At5g53450 ORG1 (OBP3-responsive gene 1) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
33.2 99.8 GSM195225 Shoot GSE7951 Genome-wide gene expression profiling of rice stigma
32.0 99.7 GSM281584 Rice Zhonghua11, biological rep2 GSE11175 Comparison of transcriptome profile between wild-type and dst mutant plants
27.9 99.6 GSM116195 Seedling_Control_rep1 GSE5167 Rice seedling hormone treatment
27.8 99.6 GSM116398 Seedling_Control_rep2 GSE5167 Rice seedling hormone treatment
25.8 99.5 GSM281585 Rice Zhonghua11, biological rep3 GSE11175 Comparison of transcriptome profile between wild-type and dst mutant plants
23.3 99.4 GSM281588 Rice mutant dst, biological rep3 GSE11175 Comparison of transcriptome profile between wild-type and dst mutant plants
21.8 99.2 GSM116401 Seedling_BAP treated_rep1 GSE5167 Rice seedling hormone treatment
19.7 99.1 GSM116402 Seedling_BAP treated_rep2 GSE5167 Rice seedling hormone treatment
16.7 98.8 GSM281587 Rice mutant dst, biological rep2 GSE11175 Comparison of transcriptome profile between wild-type and dst mutant plants
11.9 98.3 GSM116400 Seedling_IAA treated_rep2 GSE5167 Rice seedling hormone treatment
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.09 1e-14 83 Os06g0127700 AK072617.1 - - 2e-6 At4g10770 OPT7 (OLIGOPEPTIDE TRANSPORTER 7) C.G. S.X.
0.03 2e-13 79 Os02g0695900 AK062910.1 - Hypothetical protein 2e+0 At5g40690 - C.G. S.X.
0.02 2e-10 69 Os06g0127600 AK073855.1 - Conserved hypothetical protein 2e-6 At4g10770 OPT7 (OLIGOPEPTIDE TRANSPORTER 7) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.33 5e-28 127 Arabidopsis thaliana At4g16370 827332 ATOPT3 (OLIGOPEPTIDE TRANSPORTER) Encodes an oligopeptide transporter involved in metal homeostasis. - - - C.G. S.X.
0.01 1e-1 40 Glycine max GmaAffx.36972.2.S1_at BI699120 - - 3e+0 At5g41810 unknown protein C.G. S.X.
0.22 3e-145 515 Hordeum vulgare Contig14945_at Contig14945 - - 8e-36 At4g16370 ATOPT3 (OLIGOPEPTIDE TRANSPORTER) C.G. S.X.
0.07 9e-9 63 Populus trichocarpa Ptp.5199.1.S1_at CV281699 oligopeptide transporter OPT family - 7e-38 At4g16370 ATOPT3 (OLIGOPEPTIDE TRANSPORTER) C.G. S.X.
0.35 0 928 Triticum aestivum Ta.1984.1.S1_at BG604569 - - 5e-32 At4g16370 ATOPT3 (OLIGOPEPTIDE TRANSPORTER) C.G. S.X.
0.01 4e-1 36 Vitis vinifera 1614975_at CD799759 hypothetical protein LOC100264828 - 2e-1 At5g14440 - C.G. S.X.
0.70 0 1798 Zea mays Zm.16913.1.S1_at BQ619268 GT1 protein - 2e-24 At4g16370 ATOPT3 (OLIGOPEPTIDE TRANSPORTER) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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