CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os03g0744700

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 98.9 Os03g0744700 AK071178.1 - Conserved hypothetical protein 4e-2 At1g62250 unknown protein S.X. H.G.
0.80 94.6 Os11g0603200 AK059060.1 - ABCF-type protein 1e-19 At5g64840 ATGCN5 (A. THALIANA GENERAL CONTROL NON-REPRESSIBLE 5) S.X. H.G.
0.67 87.2 Os08g0432500 AK106170.1 - ATP-dependent Clp protease adaptor protein ClpSfamily protein 3e-2 At3g61678 unknown protein S.X. H.G.
0.55 73.7 Os04g0657300 CB624212 - Farnesyl pyrophosphate synthetase 2 (FPPsynthetase 2) (FPS 2) (Farnesyl diphosphate synthetase 2)[Includes: Dimethylallyltranstransferase (EC 2.5.1.1) 2e-1 At1g68552 CPuORF53 (Conserved peptide upstream open reading frame 53) S.X. H.G.
0.50 68.0 Os07g0626400 AK100600.1 - Heat shock protein DnaJ, N-terminal domaincontaining protein 3e-21 At1g77930 DNAJ heat shock N-terminal domain-containing protein S.X. H.G.
0.46 60.9 Os07g0656700 AU173917 - Protein of unknown function DUF1334 family protein 4e-11 At5g13720 - S.X. H.G.
Click here to hide the above table.

Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
12.6 98.4 GSM174883 A mock 3 dpi rep 1 with array type rice from Affymetrix GSE7256 Identification of rice genes differentially expressed upon virulent infection by Magnaporthe grisea
11.2 98.2 GSM421706 XOO, 96 hai - rep4 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
11.1 98.2 GSM421726 MOCK, 96 hai - rep4 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
10.6 98.1 GSM421686 XOC, 96 hai - rep4 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
10.1 98.0 GSM174888 C mock 3 dpi rep 2 with array type rice from Affymetrix GSE7256 Identification of rice genes differentially expressed upon virulent infection by Magnaporthe grisea
9.9 98.0 GSM421725 MOCK, 96 hai - rep3 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
9.7 98.0 GSM421702 XOO, 24 hai - rep4 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
9.6 97.9 GSM174885 B FR13 3 dpi rep 1 with array type rice from Affymetrix GSE7256 Identification of rice genes differentially expressed upon virulent infection by Magnaporthe grisea
9.5 97.9 GSM174884 E mock 4 dpi rep 1 with array type rice from Affymetrix GSE7256 Identification of rice genes differentially expressed upon virulent infection by Magnaporthe grisea
9.4 97.9 GSM421683 XOC, 96 hai - rep1 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
Click here to hide the above table.

Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.01 3e-1 38 Os02g0194300 AK072385.1 - Conserved hypothetical protein 2e-2 At1g51130 - C.G. S.X.
0.01 3e-1 38 Os11g0531800 AK058678.1 - Hypothetical protein 3e-1 At2g04810 F-box family protein C.G. S.X.
0.01 1e+0 36 Os07g0664100 NM_186063.1 - Glucose/ribitol dehydrogenase family protein 1e+0 At3g51880 HMGB1 (HIGH MOBILITY GROUP B 1) C.G. S.X.
0.01 1e+0 36 Os09g0112100 AK065354.1 - Conserved hypothetical protein 1e+0 At4g16195 self-incompatibility protein-related C.G. S.X.
0.01 5e+0 34 Os10g0446200 AK121939.1 - Conserved hypothetical protein 4e-1 At2g46060 transmembrane protein-related C.G. S.X.
Click here to hide the above table.

Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.05 4e-2 40 Arabidopsis thaliana At1g62250 842522 unknown protein F:unknown;P:unknown;C:chloroplast;P - - - C.G. S.X.
0.09 2e-1 38 Glycine max Gma.1174.1.S1_at CD397033 - - 2e-13 At1g62250 unknown protein C.G. S.X.
0.54 2e-171 601 Hordeum vulgare Contig9752_at Contig9752 - - 3e+0 At2g11651 unknown protein C.G. S.X.
0.02 8e-1 36 Populus trichocarpa PtpAffx.140014.1.A1_at CV276051 hypothetical protein - 1e-22 At1g54290 eukaryotic translation initiation factor SUI1, putative C.G. S.X.
0.48 3e-80 299 Triticum aestivum Ta.15463.1.S1_at CA484879 - - 2e+0 At2g11651 unknown protein C.G. S.X.
0.02 3e+0 32 Vitis vinifera 1621154_at CD010123 - - 1e+0 At1g11890 SEC22 C.G. S.X.
0.02 4e+0 32 Zea mays Zm.4929.2.A1_a_at AI586452 hypothetical protein LOC100192571 - 3e+0 At5g28620 protein kinase C-related C.G. S.X.
Click here to hide the above table.

Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
Click here to hide the above table.

Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
Click here to hide the above table.

Back to the CoP portal site

Back to the KAGIANA project homepage