CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os03g0739700

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.50 68.0 Os03g0739700 AK062272.1 - Protein of unknown function DUF1334 family protein 6e-1 At2g46160 zinc finger (C3HC4-type RING finger) family protein S.X. H.G.
0.83 95.8 Os08g0177400 9636.m00746 - Hypothetical protein 1e+0 At2g26500 cytochrome b6f complex subunit (petM), putative S.X. H.G.
0.80 94.6 Os01g0627800 AK101750.1 - Cytochrome P450 monooxygenase CYP72A5 (Fragment) 1e-6 At3g14660 CYP72A13 S.X. H.G.
0.78 93.4 Os04g0206600 AK106302.1 - UDP-glucuronosyl/UDP-glucosyltransferase familyprotein 3e-10 At2g31790 UDP-glucoronosyl/UDP-glucosyl transferase family protein S.X. H.G.
0.78 93.4 Os01g0373700 AK107857.1 - Conserved hypothetical protein 5e+0 At5g59840 Ras-related GTP-binding family protein S.X. H.G.
0.75 91.9 Os01g0373800 AK107432.1 - Conserved hypothetical protein 1e+0 At2g36885 unknown protein S.X. H.G.
0.73 91.1 Os01g0145900 9629.m00449 - - 4e-2 At3g18050 unknown protein S.X. H.G.
0.64 83.4 Os04g0627900 AK108443.1 - The start codon is not identified. 8e-9 At5g54940 eukaryotic translation initiation factor SUI1, putative S.X. H.G.
0.55 73.7 Os10g0344000 AK105578.1 - Multi antimicrobial extrusion protein MatE familyprotein 6e-2 At5g52450 MATE efflux protein-related S.X. H.G.
0.46 60.9 Os01g0696800 AK061435.1 - - 3e+0 At2g32710 KRP4 S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
90.2 100.0 GSM174889 H FR13 4 dpi rep 2 with array type rice from Affymetrix GSE7256 Identification of rice genes differentially expressed upon virulent infection by Magnaporthe grisea
66.7 99.9 GSM174886 F FR13 4 dpi rep 1 with array type rice from Affymetrix GSE7256 Identification of rice genes differentially expressed upon virulent infection by Magnaporthe grisea
25.6 99.5 GSM159208 Seed (S1, 0 - 2 dap), biological rep 2 GSE6893 Expression data for reproductive development in rice
18.7 99.0 GSM159209 Seed (S1, 0 - 2 dap), biological rep 3 GSE6893 Expression data for reproductive development in rice
17.1 98.8 GSM421688 XOO, 2 hai - rep2 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
15.6 98.7 GSM159207 Seed (S1, 0 - 2 dap), biological rep 1 GSE6893 Expression data for reproductive development in rice
12.9 98.4 GSM174885 B FR13 3 dpi rep 1 with array type rice from Affymetrix GSE7256 Identification of rice genes differentially expressed upon virulent infection by Magnaporthe grisea
11.3 98.2 GSM174887 D FR13 3 dpi rep 2 with array type rice from Affymetrix GSE7256 Identification of rice genes differentially expressed upon virulent infection by Magnaporthe grisea
10.0 98.0 GSM159182 Mature leaf, biological rep 3 GSE6893 Expression data for reproductive development in rice
7.8 97.6 GSM159212 Seed (S2, 3 - 4 dap), biological rep 3 GSE6893 Expression data for reproductive development in rice
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.19 1e-93 345 Os01g0194400 9629.m00931 - - 2e-3 At3g58510 DEAD box RNA helicase, putative (RH11) C.G. S.X.
0.02 1e-3 46 Os02g0633200 AK063500.1 - TPR-like domain containing protein 8e-1 At1g34000 OHP2 (ONE-HELIX PROTEIN 2) C.G. S.X.
0.02 5e-3 44 Os03g0650200 9631.m04325 - Cytochrome P450 family protein 9e-1 At5g63400 ADK1 (ADENYLATE KINASE 1) C.G. S.X.
0.01 8e-2 40 Os05g0583500 D43360 - PX-associated domain containing protein 4e+0 At4g00355 unknown protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 6e-1 36 Arabidopsis thaliana At2g46160 819223 zinc finger (C3HC4-type RING finger) family protein F:protein binding, zinc ion binding;P:unknown;C:unknown;PMOFV - - - C.G. S.X.
0.03 4e-3 44 Glycine max PsAffx.CL1623Contig1_at PsAffx.CL1623Contig1 - - 1e+0 At3g53200 AtMYB27 (myb domain protein 27) C.G. S.X.
0.31 5e-43 174 Hordeum vulgare Contig14054_at Contig14054 - - 8e+0 At1g61700 DNA-directed RNA polymerase II, putative (RPB10) C.G. S.X.
0.03 1e-3 46 Populus trichocarpa PtpAffx.208003.1.S1_at pmrna15882 hypothetical protein - 5e+0 At3g56890 F-box family protein-related C.G. S.X.
0.37 5e-48 192 Triticum aestivum TaAffx.972.1.A1_at CK205847 - - 2e+0 At2g35120 glycine cleavage system H protein, mitochondrial, putative C.G. S.X.
0.02 3e+0 32 Vitis vinifera 1617926_at CF205727.1 - - 2e+0 At5g64460 - C.G. S.X.
0.02 1e+0 34 Zea mays Zm.6726.1.S1_x_at AI395973 hypothetical protein AY106712 - 7e+0 At3g46090 ZAT7 C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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