CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os03g0736400

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 98.9 Os03g0736400 AK105812.1 - Conserved hypothetical protein 95 family protein 1e-24 At3g28460 unknown protein S.X. H.G.
0.80 94.6 Os03g0656900 AK066416.1 - NusB/RsmB/TIM44 domain containing protein 3e-9 At4g26370 antitermination NusB domain-containing protein S.X. H.G.
0.73 91.1 Os08g0345400 AK065348.1 - Conserved hypothetical protein 1e-2 At2g04360 unknown protein S.X. H.G.
0.73 91.1 Os01g0618400 NM_192814.1 - RNA helicase (Fragment) 2e-20 At5g63630 DEAD box RNA helicase, putative S.X. H.G.
0.55 73.7 Os07g0510100 AK066776.1 - Methionine aminopeptidase-like protein 3e-19 At1g13270 MAP1C (METHIONINE AMINOPEPTIDASE 1B) S.X. H.G.
0.50 68.0 Os04g0601800 AK062641.1 - Plastid protein 3e-45 At2g33430 DAL1 (DIFFERENTIATION AND GREENING-LIKE 1) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
19.4 99.0 GSM207564 Mudanjiang8 OsWRKY13 Overexpressing D11UM7-2 rep3 GSE8380 Rice Gene Network Inferred from Expression Profiling of Plants Overexpressing OsWRKY13
18.9 99.0 GSM207560 Mudanjiang8 OsWRKY13 Overexpressing D11UM1-1 rep3 GSE8380 Rice Gene Network Inferred from Expression Profiling of Plants Overexpressing OsWRKY13
18.6 99.0 GSM207559 Mudanjiang8 OsWRKY13 Overexpressing D11UM1-1 rep2 GSE8380 Rice Gene Network Inferred from Expression Profiling of Plants Overexpressing OsWRKY13
18.5 99.0 GSM207563 Mudanjiang8 OsWRKY13 Overexpressing D11UM7-2 rep2 GSE8380 Rice Gene Network Inferred from Expression Profiling of Plants Overexpressing OsWRKY13
17.4 98.9 GSM207562 Mudanjiang8 OsWRKY13 Overexpressing D11UM7-2 rep1 GSE8380 Rice Gene Network Inferred from Expression Profiling of Plants Overexpressing OsWRKY13
15.7 98.7 GSM207565 Mudanjiang8 wild type control rep1 GSE8380 Rice Gene Network Inferred from Expression Profiling of Plants Overexpressing OsWRKY13
15.7 98.7 GSM207558 Mudanjiang8 OsWRKY13 Overexpressing D11UM1-1 rep1 GSE8380 Rice Gene Network Inferred from Expression Profiling of Plants Overexpressing OsWRKY13
13.9 98.5 GSM207567 Mudanjiang8 wild type control rep3 GSE8380 Rice Gene Network Inferred from Expression Profiling of Plants Overexpressing OsWRKY13
11.8 98.3 GSM207566 Mudanjiang8 wild type control rep2 GSE8380 Rice Gene Network Inferred from Expression Profiling of Plants Overexpressing OsWRKY13
8.0 97.6 GSM254093 Rice suppressed OsSKIPa, biological repeat 1 GSE10054 Expression information of splicing factor OsSKIPa knock-down and overexpressed rice
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.04 3e-23 111 Os08g0288000 AK099411.1 - Hypothetical protein 2e+0 At4g25170 - C.G. S.X.
0.04 2e-21 105 Os03g0745400 AK071701.1 - Conserved hypothetical protein 5e-1 At4g28290 unknown protein C.G. S.X.
0.03 2e-18 95 Os05g0562000 AK066149.1 - Hypothetical protein 5e-1 At4g28290 unknown protein C.G. S.X.
0.02 6e-3 44 Os11g0470600 AK062819.1 - Conserved hypothetical protein 5e-1 At4g27540 PRA1.H (PRENYLATED RAB ACCEPTOR 1.H) C.G. S.X.
0.02 9e-2 40 Os07g0572000 AK111653.1 - WD40-like domain containing protein 7e-7 At4g02730 transducin family protein / WD-40 repeat family protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.08 1e-24 115 Arabidopsis thaliana At3g28460 822476 unknown protein F:unknown;P:biological_process unknown;C:chloroplast;BOPA - - - C.G. S.X.
0.09 3e-22 107 Glycine max Gma.17910.1.S1_at BU546781 - - 2e-22 At3g28460 unknown protein C.G. S.X.
0.46 1e-179 628 Hordeum vulgare Contig16154_at Contig16154 - - 3e-15 At3g28460 unknown protein C.G. S.X.
0.11 3e-25 117 Populus trichocarpa Ptp.7529.1.S1_at DN495630 hypothetical protein - 1e-45 At3g28460 unknown protein C.G. S.X.
0.26 4e-64 246 Triticum aestivum Ta.3734.1.A1_at CD920422 - - 2e+0 At3g42155 catalytic/ hydrolase, hydrolyzing O-glycosyl compounds C.G. S.X.
0.02 9e-1 34 Vitis vinifera 1619094_at CF405729 - - 3e+0 At2g21900 WRKY59 C.G. S.X.
0.02 1e+0 34 Zea mays Zm.16311.2.S1_at BE575048 hypothetical protein LOC100192600 - 5e-93 At5g02960 40S ribosomal protein S23 (RPS23B) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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