CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os03g0707300

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.65 83.8 Os03g0707300 AK066944.1 - Conserved hypothetical protein 5e+0 At5g23510 unknown protein S.X. H.G.
0.72 89.8 Os07g0511900 AK060218.1 - Conserved hypothetical protein 2e-1 At5g20620 UBQ4 S.X. H.G.
0.69 87.9 Os06g0247800 AK102187.1 - Dynamin-like protein (Fragment) 2e-30 At1g10290 ADL6 (DYNAMIN-LIKE PROTEIN 6) S.X. H.G.
0.67 87.2 Os03g0395600 AK063311.1 - Hypothetical protein 4e-1 At1g30260 - S.X. H.G.
0.63 82.7 Os07g0497000 AK100332.1 - Chromodomain helicase-DNA-binding protein Mi-2homolog (dMi-2) 2e-48 At5g44800 CHR4 (CHROMATIN REMODELING 4) S.X. H.G.
0.58 77.0 Os03g0750800 AK061386.1 - Transcriptional adaptor ADA2b (AT4g16420/dl4235c) 9e-11 At4g16420 ADA2B (HOMOLOG OF YEAST ADA2 2B) S.X. H.G.
0.58 77.0 Os09g0281600 AK067020.1 - SWAP/Surp domain containing protein 6e-12 At3g52120 SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / D111/G-patch domain-containing protein S.X. H.G.
0.57 77.0 Os11g0661400 AK063910.1 - AAA ATPase, central region domain containingprotein 9e-37 At1g02890 AAA-type ATPase family protein S.X. H.G.
0.56 76.3 Os03g0213300 AK058608.1 - Hypothetical protein 7e-1 At1g47495 unknown protein S.X. H.G.
0.53 71.3 Os08g0502800 AK105444.1 - SWIB/MDM2 domain containing protein 2e-5 At4g22360 SWIB complex BAF60b domain-containing protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
4.4 96.2 GSM159193 Inflorescence (P2, 3 - 5 cm), biological rep 2 GSE6893 Expression data for reproductive development in rice
3.6 95.5 GSM159191 Young inflorescence (P1, upto 3 cm), biological rep 3 GSE6893 Expression data for reproductive development in rice
3.5 95.3 GSM159185 Y Leaf, biological rep 3 GSE6893 Expression data for reproductive development in rice
3.4 95.2 GSM195218 stigma 1, biological rep1 GSE7951 Genome-wide gene expression profiling of rice stigma
3.0 94.6 GSM195219 stigma 2, biological rep 2 GSE7951 Genome-wide gene expression profiling of rice stigma
3.0 94.6 GSM195227 Anther GSE7951 Genome-wide gene expression profiling of rice stigma
2.9 94.5 GSM262006 IAC165, 11 days after mock-infection, biological replicate #1 GSE10373 Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica
2.9 94.5 GSM302919 leaf_rep2 GSE11966 Expression data from rice embryo,endosperm,root,leaf and seedling
2.9 94.5 GSM195221 Ovary 1, biological rep 1 GSE7951 Genome-wide gene expression profiling of rice stigma
2.8 94.3 GSM429982 Rice wild-type panicle rep1 GSE17194 Genome-wide gene expression profiling of rice Indica cultivar Zhongxian 3037 and mutant phoenix (pho) panicle
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.18 8e-105 383 Os07g0136800 AK073763.1 - - 5e-1 At4g36380 ROT3 (ROTUNDIFOLIA 3) C.G. S.X.
0.01 9e-3 44 Os10g0483100 AK071436.1 - Conserved hypothetical protein 1e+0 At1g07870 protein kinase family protein C.G. S.X.
0.01 4e-2 42 Os02g0537900 AK070310.1 - Vacuolar-type H+-translocating inorganicpyrophosphatase (EC 3.6.1.1) 5e-87 At1g16780 vacuolar-type H+-translocating inorganic pyrophosphatase, putative C.G. S.X.
0.01 4e-2 42 Os02g0639700 AK068974.1 - Conserved hypothetical protein 1e+0 At3g28370 unknown protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.01 5e+0 34 Arabidopsis thaliana At5g23510 832416 unknown protein F:unknown;P:unknown;C:cellular_component unknown;PO - - - C.G. S.X.
0.01 4e-1 38 Glycine max Gma.7557.1.S1_at BU091737 - - 5e-1 At4g25250 invertase/pectin methylesterase inhibitor family protein C.G. S.X.
0.44 3e-132 472 Hordeum vulgare Contig10085_at Contig10085 - - 3e+0 At5g17350 unknown protein C.G. S.X.
0.01 4e-1 38 Populus trichocarpa PtpAffx.202657.1.S1_at pmrna5307 hypothetical protein - 1e-10 At3g24790 ATP binding / kinase/ protein kinase/ protein serine/threonine kinase C.G. S.X.
0.15 1e-49 198 Triticum aestivum TaAffx.84218.1.S1_at CA642174 - - 4e+0 At1g76600 unknown protein C.G. S.X.
0.01 5e+0 32 Vitis vinifera 1621278_at CD799054 - - 4e+0 At4g01650 - C.G. S.X.
0.22 1e-29 131 Zea mays Zm.6969.1.A1_at AI065897 - - 5e-1 At1g26740 structural constituent of ribosome C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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