CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os03g0704100

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 98.9 Os03g0704100 AK070474.1 - PAP fibrillin family protein 2e+0 At1g35410 - S.X. H.G.
0.67 87.2 Os10g0419500 AK071316.1 - Acireductone dioxygenase, ARD family protein 2e-10 At5g43850 ARD4 S.X. H.G.
0.67 87.2 Os07g0656700 AU173917 - Protein of unknown function DUF1334 family protein 4e-11 At5g13720 - S.X. H.G.
0.60 79.7 Os03g0128800 AK066570.1 - Conserved hypothetical protein 7e-1 At1g23530 unknown protein S.X. H.G.
0.50 68.0 Os11g0242400 AK067025.1 - Rieske [2Fe-2S] region domain containing protein 1e-1 At1g71500 Rieske (2Fe-2S) domain-containing protein S.X. H.G.
0.38 46.9 Os01g0912700 AK068528.1 - Conserved hypothetical protein 1e-1 At2g01340 unknown protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
13.6 98.5 GSM174888 C mock 3 dpi rep 2 with array type rice from Affymetrix GSE7256 Identification of rice genes differentially expressed upon virulent infection by Magnaporthe grisea
11.7 98.2 GSM174883 A mock 3 dpi rep 1 with array type rice from Affymetrix GSE7256 Identification of rice genes differentially expressed upon virulent infection by Magnaporthe grisea
9.1 97.9 GSM174885 B FR13 3 dpi rep 1 with array type rice from Affymetrix GSE7256 Identification of rice genes differentially expressed upon virulent infection by Magnaporthe grisea
9.1 97.9 GSM174887 D FR13 3 dpi rep 2 with array type rice from Affymetrix GSE7256 Identification of rice genes differentially expressed upon virulent infection by Magnaporthe grisea
8.7 97.8 GSM174884 E mock 4 dpi rep 1 with array type rice from Affymetrix GSE7256 Identification of rice genes differentially expressed upon virulent infection by Magnaporthe grisea
8.6 97.8 GSM174890 G mock 4 dpi rep 2 with array type rice from Affymetrix GSE7256 Identification of rice genes differentially expressed upon virulent infection by Magnaporthe grisea
7.6 97.5 GSM421702 XOO, 24 hai - rep4 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
7.1 97.4 GSM421681 XOC, 24 hai - rep3 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
6.7 97.3 GSM421726 MOCK, 96 hai - rep4 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
6.5 97.2 GSM421686 XOC, 96 hai - rep4 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 2e-2 42 Os05g0351500 AK108857.1 - Hypothetical protein 2e+0 At5g47110 lil3 protein, putative C.G. S.X.
0.02 2e-2 42 Os09g0440000 AK063191.1 - Hypothetical protein 2e-1 At1g02405 proline-rich family protein C.G. S.X.
0.02 7e-2 40 Os01g0588600 9629.m03876 - Protein of unknown function DUF572 family protein 7e-3 At2g45010 unknown protein C.G. S.X.
0.02 7e-2 40 Os06g0703000 AK072944.1 - Protein kinase domain containing protein 5e-5 At5g35580 ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase C.G. S.X.
0.02 7e-2 40 Os08g0129000 9636.m00265 - - 8e+0 At5g21274 CAM6 (CALMODULIN 6) C.G. S.X.
0.02 7e-2 40 Os09g0488800 9637.m02780 - Conserved hypothetical protein 8e-1 At5g12900 unknown protein C.G. S.X.
0.01 7e-2 40 Os01g0197700 CB620528 - Cytokinin dehydrogenase 1 precursor (EC 1.5.99.12)(Cytokinin oxidase 1) (CKO 1) 1e+0 At3g63440 CKX6 (CYTOKININ OXIDASE/DEHYDROGENASE 6) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 2e+0 34 Arabidopsis thaliana At1g35410 840433 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P - - - C.G. S.X.
0.08 1e-5 52 Glycine max Gma.12775.1.S1_at CD406675 - - 9e-6 At3g26070 plastid-lipid associated protein PAP / fibrillin family protein C.G. S.X.
0.47 2e-85 315 Hordeum vulgare Contig7995_at Contig7995 - - 2e-3 At4g28180 unknown protein C.G. S.X.
0.07 2e-4 48 Populus trichocarpa PtpAffx.202809.1.S1_at pmrna5574 hypothetical protein - 4e+0 At5g50720 ATHVA22E C.G. S.X.
0.38 5e-26 119 Triticum aestivum TaAffx.66625.1.S1_at BG908611 - - 8e-2 At1g14060 - C.G. S.X.
0.02 3e+0 32 Vitis vinifera 1608800_s_at CF209291 hypothetical protein LOC100247265 - 1e-2 At1g12100 lipid binding C.G. S.X.
0.03 6e-2 38 Zea mays Zm.9407.1.A1_at BM268507 plastid-lipid-associated protein 2 - 3e-2 At4g04020 FIB (FIBRILLIN) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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