CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os03g0701200

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.71 89.6 Os03g0701200 AK099563.1 - Haloacid dehalogenase-like hydrolase domaincontaining protein 6e-1 At5g02230 haloacid dehalogenase-like hydrolase family protein S.X. H.G.
0.57 77.0 Os07g0245100 AK100710.1 - Nitrogen fixation protein 8e-48 At5g28050 cytidine/deoxycytidylate deaminase family protein S.X. H.G.
0.40 51.1 Os05g0542200 AK071306.1 - Epoxide hydrolase family protein 7e-2 At5g53050 hydrolase, alpha/beta fold family protein S.X. H.G.
0.33 38.8 Os10g0207400 AK120253.1 - Conserved hypothetical protein 4e-1 At1g70895 CLE17 (CLAVATA3/ESR-RELATED 17) S.X. H.G.
0.30 32.7 Os02g0790500 AK066691.1 - Glycosyl transferase, family 20 domain containingprotein 3e-11 At1g68020 ATTPS6 S.X. H.G.
0.30 32.7 Os01g0314100 AK067157.1 - Catalytic domain of components of variousdehydrogenase complexes containing protein 3e-7 At3g06850 BCE2 S.X. H.G.
0.29 31.1 Os05g0569300 AK065440.1 - G-box binding factor 1 2e-1 At2g47530 - S.X. H.G.
0.21 17.9 Os05g0176700 AK071729.1 - Conserved hypothetical protein 6e-6 At5g23100 unknown protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
15.6 98.7 GSM159262 Drought stress, biological rep 1 GSE6901 Expression data for stress treatment in rice seedlings
15.3 98.7 GSM159263 Drought stress, biological rep 2 GSE6901 Expression data for stress treatment in rice seedlings
14.0 98.5 GSM159264 Drought stress, biological rep 3 GSE6901 Expression data for stress treatment in rice seedlings
10.5 98.1 GSM431927 Root- -Fe+P biological rep1 GSE17245 Transcriptome analysis of iron and phosphorus interaction in rice seedlings
9.9 98.0 GSM431928 Root- -Fe+P biological rep2 GSE17245 Transcriptome analysis of iron and phosphorus interaction in rice seedlings
8.3 97.7 GSM159266 Salt stress, biological rep 2 GSE6901 Expression data for stress treatment in rice seedlings
7.2 97.4 GSM159267 Salt stress, biological rep 3 GSE6901 Expression data for stress treatment in rice seedlings
6.7 97.3 GSM159265 Salt stress, biological rep 1 GSE6901 Expression data for stress treatment in rice seedlings
6.0 97.0 GSM159182 Mature leaf, biological rep 3 GSE6893 Expression data for reproductive development in rice
5.7 96.9 GSM304390 Stable transgenic rice line GSE12069 Mycroarray analyses reveal that plant mutagenesis may induce more transcriptomic changes than transgene insertion
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 3e-4 48 Os05g0212000 9633.m01079 - - 4e-2 At2g20613 unknown protein C.G. S.X.
0.02 3e-4 48 Os06g0166500 AK102541.1 - AUX/IAA protein family protein 2e-1 At2g23120 - C.G. S.X.
0.02 3e-4 48 Os06g0212600 9634.m01070 - Xyloglucan fucosyltransferase family protein 3e+0 At3g50250 unknown protein C.G. S.X.
0.01 3e-4 48 Os03g0163300 AK103418.1 - Glutathione reductase (Fragment) 2e-8 At3g54660 GR (GLUTATHIONE REDUCTASE) C.G. S.X.
0.01 1e-3 46 Os12g0556500 AK110372.1 - Hypothetical protein 1e+0 At2g23320 WRKY15 C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 6e-1 36 Arabidopsis thaliana At5g02230 831784 haloacid dehalogenase-like hydrolase family protein F:hydrolase activity, catalytic activity;P:metabolic process;C:cellular_component unknown;OBPFA - - - C.G. S.X.
0.02 6e-2 40 Glycine max GmaAffx.87604.1.S1_at AW596527 - - 9e-1 At5g60360 AALP (Arabidopsis aleurain-like protease) C.G. S.X.
0.45 3e-100 365 Hordeum vulgare Contig4956_at Contig4956 - - 2e+0 At5g01840 OFP1 (OVATE FAMILY PROTEIN 1) C.G. S.X.
0.02 8e-1 36 Populus trichocarpa PtpAffx.218197.1.S1_at pmrna33746 hypothetical protein - 5e+0 At4g10810 unknown protein C.G. S.X.
0.47 8e-93 341 Triticum aestivum Ta.7406.1.S1_x_at BJ242436 - - 1e+1 At2g47900 AtTLP3 (TUBBY LIKE PROTEIN 3) C.G. S.X.
0.02 7e-1 34 Vitis vinifera 1616547_at BQ798895 hypothetical protein LOC100256265 - 5e-21 At5g23230 NIC2 (NICOTINAMIDASE 2) C.G. S.X.
0.36 6e-73 274 Zea mays Zm.1050.1.S1_at CO524144 hypothetical protein LOC100217049 - 3e+0 At5g63400 ADK1 (ADENYLATE KINASE 1) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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