CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os03g0691400

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.77 93.1 Os03g0691400 AK071319.1 - Thioesterase superfamily domain containing protein 1e-4 At5g48950 thioesterase family protein S.X. H.G.
0.40 51.1 Os07g0656800 AK099536.1 - Conserved hypothetical protein 3e+0 At5g66470 GTP binding / RNA binding S.X. H.G.
0.31 34.5 Os07g0657400 CB633791 - Protein of unknown function DUF563 family protein 7e-5 At2g41640 transferase, transferring glycosyl groups S.X. H.G.
0.29 31.1 Os03g0249700 AK120462.1 - - 2e+0 At4g39360 unknown protein S.X. H.G.
0.22 19.4 Os06g0175500 AK058599.1 - Epsin, N-terminal domain containing protein 8e-11 At5g35200 epsin N-terminal homology (ENTH) domain-containing protein S.X. H.G.
0.21 17.9 Os06g0238300 AK107758.1 - FMN-binding split barrel domain containing protein 2e+0 At5g54490 PBP1 (PINOID-BINDING PROTEIN 1) S.X. H.G.
0.04 2.0 Os01g0784800 AK059820.1 - Minor allergen 4e-14 At5g54500 FQR1 (FLAVODOXIN-LIKE QUINONE REDUCTASE 1) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
8.6 97.8 GSM159202 Inflorescence (P5, 15 - 22 cm), biological rep 2 GSE6893 Expression data for reproductive development in rice
7.3 97.5 GSM387559 Transgenic line 22, biological rep. 1 GSE15448 Glycinebetaine-induced water-stress tolerance in codA-expressing transgenic indica rice
7.2 97.4 GSM387561 Transgenic line 22, biological rep. 3 GSE15448 Glycinebetaine-induced water-stress tolerance in codA-expressing transgenic indica rice
6.7 97.3 GSM159201 Inflorescence (P5, 15 - 22 cm), biological rep 1 GSE6893 Expression data for reproductive development in rice
6.1 97.1 GSM159203 Inflorescence (P5, 15 - 22 cm), biological rep 3 GSE6893 Expression data for reproductive development in rice
5.8 97.0 GSM387564 Wild-type, biological rep. 3 GSE15448 Glycinebetaine-induced water-stress tolerance in codA-expressing transgenic indica rice
5.3 96.7 GSM387563 Wild-type, biological rep. 2 GSE15448 Glycinebetaine-induced water-stress tolerance in codA-expressing transgenic indica rice
5.3 96.7 GSM387562 Wild-type, biological rep. 1 GSE15448 Glycinebetaine-induced water-stress tolerance in codA-expressing transgenic indica rice
5.1 96.6 GSM387557 Transgenic line 4, biological rep. 2 GSE15448 Glycinebetaine-induced water-stress tolerance in codA-expressing transgenic indica rice
5.0 96.6 GSM387560 Transgenic line 22, biological rep. 2 GSE15448 Glycinebetaine-induced water-stress tolerance in codA-expressing transgenic indica rice
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.12 2e-26 121 Os05g0137700 9633.m00397 - Thioesterase superfamily domain containing protein 2e-1 At1g48320 thioesterase family protein C.G. S.X.
0.03 1e-2 42 Os01g0311400 NM_183695.1 - Zn-finger, RING domain containing protein 5e+0 At5g43410 ethylene-responsive factor, putative C.G. S.X.
0.02 3e-4 48 Os04g0662400 AK108652.1 - Auxin responsive SAUR protein family protein 8e+0 At5g28360 ACS3 (1-AMINOCYCLOPROPANE-1-CARBOXYLATE SYNTHASE LIKE PSEUDOGENE) C.G. S.X.
0.02 1e-2 42 Os07g0673000 AK063364.1 - Conserved hypothetical protein 7e-1 At5g27710 unknown protein C.G. S.X.
0.02 6e-2 40 Os06g0213500 9634.m01077 - - 9e-3 At3g49300 proline-rich family protein C.G. S.X.
0.02 6e-2 40 Os11g0198900 AK107759.1 - Hypothetical protein 6e+0 At5g38800 AtbZIP43 (Arabidopsis thaliana basic leucine-zipper 43) C.G. S.X.
0.01 1e-2 42 Os12g0141800 AK100388.1 - Hypothetical protein 3e-1 At2g18196 metal ion binding C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.06 1e-4 48 Arabidopsis thaliana At5g48950 834953 thioesterase family protein F:hydrolase activity, acting on ester bonds, acyl-CoA thioesterase activity;P:biological_process unknown;C:cellular_component unknown;BOP - - - C.G. S.X.
0.03 2e-1 38 Glycine max Gma.16441.1.S1_a_at BU548048 - - 5e-25 At1g48320 thioesterase family protein C.G. S.X.
0.27 2e-57 222 Hordeum vulgare Contig12737_at Contig12737 - - 2e-3 At5g48950 thioesterase family protein C.G. S.X.
0.08 3e-6 54 Populus trichocarpa PtpAffx.5931.1.A1_a_at AJ779880 hypothetical protein - 1e-1 At5g48950 thioesterase family protein C.G. S.X.
0.34 4e-51 202 Triticum aestivum Ta.22076.1.S1_x_at BQ161202 - - 4e-1 At5g48950 thioesterase family protein C.G. S.X.
0.07 4e-5 48 Vitis vinifera 1621137_at CB975552 hypothetical protein LOC100259669 - 1e-1 At1g48320 thioesterase family protein C.G. S.X.
0.32 8e-72 270 Zea mays Zm.18012.1.A1_at CK827313 - - 2e-3 At5g48950 thioesterase family protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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