CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os03g0663500

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.92 99.1 Os03g0663500 U77656.1 - Thaumatin, pathogenesis-related family protein 7e+0 At3g25400 - S.X. H.G.
0.40 51.1 Os11g0592000 AK121059.1 - Barwin 7e-3 At3g04720 PR4 (PATHOGENESIS-RELATED 4) S.X. H.G.
0.35 41.7 Os09g0472900 BI797815 - Expansin-related protein 2 precursor (AtEXPR2)(Ath-ExpGamma-1.1) 8e+0 At3g03920 Gar1 RNA-binding region family protein S.X. H.G.
0.35 41.7 Os10g0542900 BM038035 - Chitinase (EC 3.2.1.14) (Fragment) 3e-5 At3g12500 ATHCHIB (ARABIDOPSIS THALIANA BASIC CHITINASE) S.X. H.G.
0.17 12.6 Os01g0940700 AB027428.1 - Beta-1,3-glucanase (Fragment) 4e-2 At5g20560 beta-1,3-glucanase, putative S.X. H.G.
0.13 8.2 Os06g0569500 CB618023 - Ent-kaurene oxidase (EC 1.14.13.78) (AtKO1)(Cytochrome P450 701A3) 3e+0 At1g78172 unknown protein S.X. H.G.
0.03 1.4 Os06g0713800 AK059671.1 - Alpha-amylase isozyme 2A precursor (EC 3.2.1.1)(1,4-alpha-D-glucan glucanohydrolase) 6e-2 At4g36780 transcription regulator S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
63.2 99.9 GSM159209 Seed (S1, 0 - 2 dap), biological rep 3 GSE6893 Expression data for reproductive development in rice
49.5 99.9 GSM375648 Taichung 65_shoot_replicate 2 GSE15046 Transcriptome analysis of gibberellin-signaling mutants in rice
43.9 99.9 GSM375649 Taichung 65_shoot_replicate 3 GSE15046 Transcriptome analysis of gibberellin-signaling mutants in rice
42.8 99.9 GSM375647 Taichung 65_shoot_replicate 1 GSE15046 Transcriptome analysis of gibberellin-signaling mutants in rice
29.5 99.7 GSM159207 Seed (S1, 0 - 2 dap), biological rep 1 GSE6893 Expression data for reproductive development in rice
25.6 99.5 GSM159208 Seed (S1, 0 - 2 dap), biological rep 2 GSE6893 Expression data for reproductive development in rice
19.9 99.1 GSM154959 Leaf_OsRR6-overexpressor_replicate 1 GSE6720 Gene expression in OsRR6-overexpression line
18.4 99.0 GSM159212 Seed (S2, 3 - 4 dap), biological rep 3 GSE6893 Expression data for reproductive development in rice
9.6 97.9 GSM159210 Seed (S2, 3 - 4 dap), biological rep 1 GSE6893 Expression data for reproductive development in rice
9.5 97.9 GSM262020 Nipponbare, 11 days after infection with S. hermonthica, biological replicate #1 GSE10373 Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.46 3e-96 353 Os03g0661600 U77657.1 - Alpha-amylase/trypsin inhibitor (Antifungalprotein) 6e-1 At3g60270 uclacyanin, putative C.G. S.X.
0.10 4e-18 93 Os01g0113500 AK106707.1 - Protein kinase domain containing protein 1e+0 At5g51451 unknown protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 7e+0 32 Arabidopsis thaliana At3g25400 822124 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;BOMPAF - - - C.G. S.X.
0.12 5e-20 99 Glycine max Gma.2033.1.S1_s_at BI320403 - - 9e-4 At1g75050 - C.G. S.X.
0.22 1e-15 83 Hordeum vulgare Contig2789_at Contig2789 - - 5e-1 At1g75040 PR5 (PATHOGENESIS-RELATED GENE 5) C.G. S.X.
0.02 3e+0 34 Populus trichocarpa PtpAffx.30432.1.A1_at CV276128 - - 1e+0 At2g35700 ERF38 (ERF FAMILY PROTEIN 38) C.G. S.X.
0.54 2e-95 349 Triticum aestivum TaAffx.108908.1.S1_x_at CA684616 - - 1e+0 At2g36450 HRD (HARDY) C.G. S.X.
0.05 9e-6 50 Vitis vinifera 1616413_at AF003007.1 VVTL1 - 4e-5 At4g11650 ATOSM34 (osmotin 34) C.G. S.X.
0.44 9e-50 196 Zea mays Zm.281.1.S1_s_at U06831.1 hypothetical LOC542299 - 2e+0 At5g55170 SUMO3 (SMALL UBIQUITIN-LIKE MODIFIER 3) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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