CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os03g0650200

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.80 94.6 Os03g0650200 9631.m04325 - Cytochrome P450 family protein 9e-1 At5g63400 ADK1 (ADENYLATE KINASE 1) S.X. H.G.
0.60 79.7 Os12g0226700 AK070393.1 - Allyl alcohol dehydrogenase 1e-5 At3g03080 NADP-dependent oxidoreductase, putative S.X. H.G.
0.40 51.1 Os03g0574900 AK068853.1 - K+ potassium transporter family protein 1e+0 At5g36805 - S.X. H.G.
0.17 12.6 Os05g0586600 AK105697.1 - Plastid sigma factor SIG5 8e-1 At2g33820 MBAC1 S.X. H.G.
0.14 9.3 Os03g0254200 CB624264 - Amino acid/polyamine transporter II family protein 6e-1 At4g34340 TAF8 (TBP-ASSOCIATED FACTOR 8) S.X. H.G.
0.11 6.5 Os10g0529700 AF402795.1 - - 6e-1 At5g19880 peroxidase, putative S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
78.8 99.9 GSM421706 XOO, 96 hai - rep4 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
32.3 99.8 GSM174889 H FR13 4 dpi rep 2 with array type rice from Affymetrix GSE7256 Identification of rice genes differentially expressed upon virulent infection by Magnaporthe grisea
26.3 99.5 GSM174886 F FR13 4 dpi rep 1 with array type rice from Affymetrix GSE7256 Identification of rice genes differentially expressed upon virulent infection by Magnaporthe grisea
18.6 99.0 GSM421703 XOO, 96 hai - rep1 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
16.3 98.8 GSM421704 XOO, 96 hai - rep2 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
13.7 98.5 GSM421726 MOCK, 96 hai - rep4 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
13.2 98.4 GSM421682 XOC, 24 hai - rep4 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
12.0 98.3 GSM421705 XOO, 96 hai - rep3 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
9.7 98.0 GSM421686 XOC, 96 hai - rep4 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
8.7 97.8 GSM421702 XOO, 24 hai - rep4 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.37 3e-101 371 Os06g0204000 9634.m00999 - - 2e+0 At5g56950 NAP1 C.G. S.X.
0.18 8e-9 63 Os02g0503100 9630.m02864 - Cytochrome P450 monooxygenase CYP92A1 3e+0 At3g45230 hydroxyproline-rich glycoprotein family protein C.G. S.X.
0.16 1e-100 369 Os11g0142400 AK067423.1 - Strictosidine synthase family protein 1e-2 At2g41290 strictosidine synthase family protein C.G. S.X.
0.14 8e-9 63 Os09g0441100 AK107584.1 - Cytochrome P450 monooxygenase CYP92A1 4e+0 At5g67070 RALFL34 (ralf-like 34) C.G. S.X.
0.13 3e-8 61 Os09g0264400 AK100987.1 - E-class P450, group I family protein 6e-2 At5g54530 unknown protein C.G. S.X.
0.10 6e-16 87 Os06g0613600 9634.m03950 - Cytochrome P450 family protein 3e+0 At4g13195 CLE44 (CLAVATA3/ESR-RELATED 44) C.G. S.X.
0.08 2e-9 65 Os03g0850200 NM_185174.1 - Cytochrome P450 71E1 (EC 1.14.13.68)(4-hydroxyphenylacetaldehyde oxime monooxygenase) 3e+0 At5g55570 unknown protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.01 9e-1 36 Arabidopsis thaliana At5g63400 836459 ADK1 (ADENYLATE KINASE 1) encodes a protein similar to adenylate kinase. - - - C.G. S.X.
0.03 8e-2 40 Glycine max PsAffx.CL506Contig1_at PsAffx.CL506Contig1 - - 4e-4 At5g66140 PAD2 (PROTEASOME ALPHA SUBUNIT D 2) C.G. S.X.
0.04 5e-4 46 Hordeum vulgare Contig15786_at Contig15786 - - 1e-4 At3g61880 CYP78A9 (CYTOCHROME P450 78A9) C.G. S.X.
0.02 3e-1 38 Populus trichocarpa PtpAffx.218329.1.S1_at pmrna33901 hypothetical protein - 2e+1 At5g14105 unknown protein C.G. S.X.
0.14 4e-9 63 Triticum aestivum TaAffx.57796.1.S1_at CA625063 - - 7e-2 At5g45740 unknown protein C.G. S.X.
0.02 1e+0 34 Vitis vinifera 1622687_at CB344274 hypothetical protein LOC100258159 - 2e-6 At1g01190 CYP78A8 C.G. S.X.
0.07 2e-3 44 Zea mays Zm.9563.1.A1_at AY072297.1 flavonoid 3-monooxygenase - 3e+0 At4g16410 unknown protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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