CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os03g0622400

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.67 87.2 Os03g0622400 9631.m04085 - Conserved hypothetical protein 4e+0 At5g05370 ubiquinol-cytochrome C reductase complex ubiquinone-binding protein, putative / ubiquinol-cytochrome C reductase complex 8.2 kDa protein, putative S.X. H.G.
0.80 94.6 Os06g0275750 NM_185804.1 - - 1e-1 At2g27580 zinc finger (AN1-like) family protein S.X. H.G.
0.60 79.7 Os09g0259366 9637.m00619 - - 6e+0 At5g60400 unknown protein S.X. H.G.
0.56 76.3 Os03g0638100 9631.m04211 - - 3e+0 At2g22470 AGP2 (ARABINOGALACTAN PROTEIN 2) S.X. H.G.
0.55 73.7 Os09g0481650 9637.m02714 - - 3e-1 At1g44830 AP2 domain-containing transcription factor TINY, putative S.X. H.G.
0.53 71.3 Os06g0528000 NM_196265.1 - - 1e+0 At5g52570 BETA-OHASE 2 (BETA-CAROTENE HYDROXYLASE 2) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
137.7 100.0 GSM422674 Musa_DNA_RICE GSE16865 Heterologous microarrays for the study of drought stress in Musa
35.1 99.8 GSM422676 Control GSE16865 Heterologous microarrays for the study of drought stress in Musa
22.8 99.3 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
20.4 99.1 GSM377082 Genomic DNA - 45 day old leaf sample - mutant g9799 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
19.6 99.1 GSM422672 Drought GSE16865 Heterologous microarrays for the study of drought stress in Musa
18.6 99.0 GSM377085 Genomic DNA - 45 day old leaf sample - mutant f2045 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
18.1 98.9 GSM377078 Genomic DNA - 45 day old leaf sample - mutant g6603 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
17.5 98.9 GSM377076 Genomic DNA - 45 day old leaf sample - mutant g6485 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
17.1 98.8 GSM377074 Genomic DNA - 45 day old leaf sample - mutant g282 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
16.6 98.8 GSM377080 Genomic DNA - 45 day old leaf sample - mutant g6728 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.04 7e-3 42 Os07g0514700 9635.m03256 - - 9e-1 At5g55790 unknown protein C.G. S.X.
0.01 5e-1 36 Os03g0207100 9631.m01005 - - 1e+0 At2g21880 ATRAB7A C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.05 4e+0 32 Arabidopsis thaliana At5g05370 830419 ubiquinol-cytochrome C reductase complex ubiquinone-binding protein, putative / ubiquinol-cytochrome C reductase complex 8.2 kDa protein, putative F:ubiquinol-cytochrome-c reductase activity;P:unknown;C:mitochondrial respiratory chain complex III;P - - - C.G. S.X.
0.04 3e-1 36 Glycine max Gma.15777.1.A1_at CD417082 - - 1e-9 At3g56910 PSRP5 (PLASTID-SPECIFIC 50S RIBOSOMAL PROTEIN 5) C.G. S.X.
0.04 2e+0 32 Hordeum vulgare HZ65M11r_at HZ65M11r - - 2e-5 At1g22480 plastocyanin-like domain-containing protein C.G. S.X.
0.04 1e+0 34 Populus trichocarpa PtpAffx.62600.1.A1_at CV273390 hypothetical protein - 3e+0 At5g45940 atnudt11 (Arabidopsis thaliana Nudix hydrolase homolog 11) C.G. S.X.
0.04 6e-2 38 Triticum aestivum Ta.14468.2.S1_at BJ267272 - - 4e+0 At2g26120 glycine-rich protein C.G. S.X.
0.04 3e-1 34 Vitis vinifera 1606724_at CF215838 hypothetical protein LOC100247480 - 4e-9 At1g25530 lysine and histidine specific transporter, putative C.G. S.X.
0.04 4e-1 34 Zea mays Zm.1937.1.S1_at CN845484 hypothetical protein LOC100277662 - 5e+0 At3g50800 unknown protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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