Gene omics information

Query gene ID Os03g0617500
Gene name
Organism Oryza sativa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.5978.0Os03g0617500AK068729.1-Cyclin, N-terminal domain containing protein7e-2At3g42310unknown proteinS.X.H.G.
0.5573.7Os01g0236300AK102521.1-Auxin response factor 182e-2At4g23980ARF9 (AUXIN RESPONSE FACTOR 9)S.X.H.G.
0.4558.8Os11g01404009640.m00336-Calcium-translocating P-type ATPase, PMCA-typefamily protein2e-24At3g57330ACA11 (autoinhibited Ca2+-ATPase 11)S.X.H.G.
0.3440.0Os01g0897600CA762923-Glycoside hydrolase, family 1 protein2e-7At5g36890BGLU42 (BETA GLUCOSIDASE 42)S.X.H.G.
0.3338.8Os06g0717200AK111824.1-Leucine-rich repeat/receptor protein kinaseprecursor7e-12At3g49670BAM2 (BARELY ANY MERISTEM 2)S.X.H.G.
0.2727.5Os06g0222400AK063886.1-Hypothetical protein2e-3At5g46780VQ motif-containing proteinS.X.H.G.
0.2219.4Os05g0228400AK121917.1-Basic helix-loop-helix dimerisation region bHLHdomain containing protein8e-8At2g20100ethylene-responsive family proteinS.X.H.G.
0.2117.9Os04g0650900AK064480.1-Alpha-N-acetylglucosaminidase3e-14At5g13690alpha-N-acetylglucosaminidase family / NAGLU familyS.X.H.G.
0.2117.9Os06g0488600AK058968.1-Hypothetical protein5e-24At3g27870haloacid dehalogenase-like hydrolase family proteinS.X.H.G.
0.2016.5Os05g0120700AK062874.1-Cation transporting ATPase, C-terminal domaincontaining protein2e-23At1g07810ECA1 (ER-TYPE CA2+-ATPASE 1)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
19.299.0GSM262017Nipponbare, 4 days after infection with S. hermonthica, biological replicate #2GSE10373Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica
11.798.2GSM262014Nipponbare, 4 days after mock-infection, biological replicate #1GSE10373Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica
10.498.1GSM262008IAC165, 11 days after infection with S. hermonthica, biological replicate #1GSE10373Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica
10.498.1GSM262000IAC165, 2 days after infection with S. hermonthica, biological replicate #1GSE10373Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica
10.298.0GSM262015Nipponbare, 4 days after mock-infection, biological replicate #2GSE10373Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica
10.198.0GSM262005IAC165, 4 days after infection with S. hermonthica, biological replicate #2GSE10373Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica
9.597.9GSM4094309311_young panicle 2cm, biological rep1GSE16265SNEP: Simultaneous detection of nucleotide and expression polymorphisms using Affymetrix GeneChip
9.297.9GSM262016Nipponbare, 4 days after infection with S. hermonthica, biological replicate #1GSE10373Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica
7.497.5GSM149411Rice Bala 0ppm Arsenate (Control) Rep3GSE4471Expression data from rice varieties Azucena and Bala grown in 0 and 1ppm arsenate
7.397.5GSM262013Nipponbare, 2 days after infection with S. hermonthica, biological replicate #2GSE10373Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.182e-56222Os12g0588800AK064396.1-Cyclin, N-terminal domain containing protein3e-3At4g19150ankyrin repeat family proteinC.G.S.X.
0.042e-965Os03g0203800AK070370.1-Cyclin, N-terminal domain containing protein6e-5At1g75550glycine-rich proteinC.G.S.X.
0.024e-861Os11g0633700BU666935--1e+0At2g17785zinc-binding protein-relatedC.G.S.X.
0.022e-656Os05g0155300AK069217.1-HIRA-interacting protein 5 (mHIRIP5)1e-14At1g51390NFU5C.G.S.X.
0.019e-654Os03g0144500AK122034.1-The start codon is not identified.1e-2At2g20370MUR3 (MURUS 3)C.G.S.X.
0.019e-654Os09g0413200AK069925.1-Abortive infection protein family protein7e-5At1g14270CAAX amino terminal protease family proteinC.G.S.X.
0.014e-552Os08g0138600AK120206.1--4e-1At5g50390pentatricopeptide (PPR) repeat-containing proteinC.G.S.X.
0.014e-552Os11g0661200AK069534.1-Heat shock protein DnaJ, N-terminal domaincontaining protein8e-12At4g12770heat shock protein bindingC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.027e-240Arabidopsis thalianaAt3g42310823222unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;VMPO---C.G.S.X.
0.034e-448Glycine maxPsAffx.C3000031_atPsAffx.C3000031--4e-1At1g11700unknown proteinC.G.S.X.
0.039e-342Hordeum vulgareContig14144_atContig14144--4e-2At3g19900unknown proteinC.G.S.X.
0.032e-346Populus trichocarpaPtpAffx.200138.1.S1_atpmrna257hypothetical protein-2e-33At3g14180transcription factorC.G.S.X.
0.283e-106387Triticum aestivumTaAffx.18541.1.S1_atCF182094--3e-1At3g46666unknown proteinC.G.S.X.
0.023e-136Vitis vinifera1616577_atBQ792277hypothetical protein LOC100261345-6e+0At3g54620BZIP25 (BASIC LEUCINE ZIPPER 25)C.G.S.X.
0.032e-344Zea maysZm.13852.1.A1_atAF351192.1--2e+1At5g15970KIN2C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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