CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os03g0612800

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.67 87.2 Os03g0612800 9631.m04004 - - 1e+0 At3g29305 unknown protein S.X. H.G.
0.73 91.1 Os11g0187600 AK106272.1 - Heat shock protein 70 9e-7 At5g02500 HSC70-1 (HEAT SHOCK COGNATE PROTEIN 70-1) S.X. H.G.
0.69 87.9 Os07g0692800 9635.m04977 - Protein synthesis initiation factor eIF2 alpha 3e-21 At2g40290 eukaryotic translation initiation factor 2 subunit 1, putative / eIF-2A, putative / eIF-2-alpha, putative S.X. H.G.
0.67 87.2 Os12g0211400 9640.m01026 - HhH-GPD family protein 7e-1 At4g17310 unknown protein S.X. H.G.
0.61 81.2 Os03g0703700 9631.m04847 - - 2e-3 At5g63740 zinc finger protein-related S.X. H.G.
0.59 78.0 Os01g0142500 NM_184317.1 - Myb, DNA-binding domain containing protein 2e-15 At5g58900 myb family transcription factor S.X. H.G.
0.58 77.0 Os11g0485700 9639.m02669 - - 2e+0 At4g23080 unknown protein S.X. H.G.
0.57 77.0 Os04g0152000 9632.m00594 - - 2e-4 At5g45530 unknown protein S.X. H.G.
0.54 71.9 Os07g0453000 NM_187150.1 - Conserved hypothetical protein 2e+0 At1g50460 HKL1 (HEXOKINASE-LIKE 1) S.X. H.G.
0.52 69.6 Os01g0728000 AK106601.1 - Hypothetical protein 2e-1 At3g33187 - S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
97.0 100.0 GSM422672 Drought GSE16865 Heterologous microarrays for the study of drought stress in Musa
32.6 99.8 GSM377075 Genomic DNA - 45 day old leaf sample - mutant g650 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
27.5 99.6 GSM377074 Genomic DNA - 45 day old leaf sample - mutant g282 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
24.9 99.5 GSM377084 Genomic DNA - 45 day old leaf sample - mutant f1856 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
23.6 99.4 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
22.1 99.3 GSM377072 Genomic DNA - 45 day old leaf sample - mutant d1137 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
19.8 99.1 GSM377081 Genomic DNA - 45 day old leaf sample - mutant g7534 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
19.5 99.1 GSM377078 Genomic DNA - 45 day old leaf sample - mutant g6603 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
19.1 99.0 GSM377073 Genomic DNA - 45 day old leaf sample - mutant d2943 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
18.4 99.0 GSM377086 Genomic DNA - 45 day old leaf sample - IR64 wtcheck GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.11 5e-1 36 Os11g0256300 AK066271.1 - Conserved hypothetical protein 7e+0 At5g11020 ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase C.G. S.X.
0.02 5e-1 36 Os04g0108300 BQ907535 - Protein of unknown function DUF177 domaincontaining protein 9e-2 At4g25434 ATNUDT10 (Arabidopsis thaliana Nudix hydrolase homolog 10) C.G. S.X.
0.02 5e-1 36 Os07g0105900 AK059175.1 - NB-ARC domain containing protein 1e-2 At2g22430 ATHB6 C.G. S.X.
0.01 5e-1 36 Os01g0159400 CB656566 - Acyl-CoA dehydrogenase family protein 1e-6 At3g51840 ACX4 (ACYL-COA OXIDASE 4) C.G. S.X.
0.01 5e-1 36 Os02g0508500 AK066496.1 - Plant MuDR transposase domain containing protein 4e-1 At2g26770 plectin-related C.G. S.X.
0.01 5e-1 36 Os07g0170900 AK106442.1 - Hypothetical protein 4e-3 At2g35960 NHL12 C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.04 1e+0 34 Arabidopsis thaliana At3g29305 822588 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system - - - C.G. S.X.
0.05 4e-1 36 Glycine max HgAffx.136.1.A1_at AB020515.1 - - 7e-1 At3g25730 AP2 domain-containing transcription factor, putative C.G. S.X.
0.03 5e-1 34 Hordeum vulgare Contig13164_at Contig13164 - - 2e+0 At5g60553 - C.G. S.X.
0.04 2e+0 34 Populus trichocarpa Ptp.7737.1.S1_s_at DN499091 hypothetical protein - 8e-1 At5g10350 polyadenylate-binding protein family protein / PABP family protein C.G. S.X.
0.05 3e-1 36 Triticum aestivum TaAffx.22629.1.A1_at CA747158 - - 6e-1 At5g42635 glycine-rich protein C.G. S.X.
0.03 5e-3 40 Vitis vinifera 1618605_at CB342936 hypothetical protein LOC100264965 - 2e-12 At3g20240 mitochondrial substrate carrier family protein C.G. S.X.
0.03 7e+0 30 Zea mays ZmAffx.825.1.A1_at AI770513 - - 5e-2 At3g06455 splicing factor-related C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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