CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os03g0610800

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.60 79.7 Os03g0610800 AK107194.1 - Serpin 3e+0 At1g72416 heat shock protein binding S.X. H.G.
0.55 73.7 Os06g0120200 AK066196.1 - Protein of unknown function DUF594 family protein 3e-1 At1g74560 NRP1 (NAP1-RELATED PROTEIN 1) S.X. H.G.
0.38 46.9 Os01g0227500 AK120914.1 - Cytochrome P450 family protein 2e-1 At4g33960 unknown protein S.X. H.G.
0.36 44.0 Os04g0295500 AK065384.1 - Conserved hypothetical protein 4e-1 At1g65040 protein binding / zinc ion binding S.X. H.G.
0.35 41.7 Os12g0438300 AK067669.1 - Disease resistance protein family protein 3e+0 At3g60090 VQ motif-containing protein S.X. H.G.
0.33 38.8 Os08g0113500 AK071052.1 - No apical meristem (NAM) protein family protein 1e-3 At2g02450 ANAC035 (Arabidopsis NAC domain containing protein 35) S.X. H.G.
0.29 31.1 Os07g0619400 AK062716.1 - Calcium-binding EF-hand domain containing protein 9e-2 At1g17880 nascent polypeptide-associated complex (NAC) domain-containing protein / BTF3b-like transcription factor, putative S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
11.4 98.2 GSM422672 Drought GSE16865 Heterologous microarrays for the study of drought stress in Musa
10.6 98.1 GSM154959 Leaf_OsRR6-overexpressor_replicate 1 GSE6720 Gene expression in OsRR6-overexpression line
10.1 98.0 GSM154953 Leaf_DMSO-treatment_120min_replicate 3 GSE6719 Cytokinin responsive genes in rice
10.0 98.0 GSM154957 Leaf_control_replicate 1 GSE6720 Gene expression in OsRR6-overexpression line
9.6 97.9 GSM255763 antiOsLIC collar chip GSE12097 antiOsLIC collar chip
9.4 97.9 GSM154960 Leaf_OsRR6-overexpressor_replicate 2 GSE6720 Gene expression in OsRR6-overexpression line
9.3 97.9 GSM154946 Leaf_DMSO-treatment_30min_replicate 2 GSE6719 Cytokinin responsive genes in rice
9.2 97.9 GSM255762 wt collar chip GSE12097 antiOsLIC collar chip
9.1 97.9 GSM154951 Leaf_DMSO-treatment_120min_replicate 1 GSE6719 Cytokinin responsive genes in rice
8.1 97.7 GSM154952 Leaf_DMSO-treatment_120min_replicate 2 GSE6719 Cytokinin responsive genes in rice
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.57 0 960 Os03g0610700 AK121227.1 - Serpin 2e+0 At1g58007 unknown protein C.G. S.X.
0.02 2e-2 42 Os04g0488200 9632.m03917 - TPR-like domain containing protein 2e-5 At2g03880 pentatricopeptide (PPR) repeat-containing protein C.G. S.X.
0.02 2e-2 42 Os07g0603700 9635.m04126 - E-class P450, group I family protein 4e-12 At1g01190 CYP78A8 C.G. S.X.
0.01 1e-3 46 Os01g0197700 CB620528 - Cytokinin dehydrogenase 1 precursor (EC 1.5.99.12)(Cytokinin oxidase 1) (CKO 1) 1e+0 At3g63440 CKX6 (CYTOKININ OXIDASE/DEHYDROGENASE 6) C.G. S.X.
0.01 1e-3 46 Os03g0124000 AK121207.1 - Homeobox domain containing protein 2e-5 At4g36870 BLH2 (BEL1-LIKE HOMEODOMAIN 2) C.G. S.X.
0.01 1e-3 46 Os03g0124100 AK107007.1 - Protein of unknown function DUF604 family protein 4e-6 At1g07850 transferase, transferring glycosyl groups C.G. S.X.
0.01 2e-2 42 Os02g0329300 AK100291.1 - Conserved hypothetical protein 3e-17 At5g40740 unknown protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 3e+0 34 Arabidopsis thaliana At1g72416 3767688 heat shock protein binding F:heat shock protein binding;P:biological_process unknown;C:cellular_component unknown;BOMFPAV - - - C.G. S.X.
0.06 2e-8 61 Glycine max GmaAffx.67038.1.S1_at BE022668 - - 3e-9 At1g47710 serpin, putative / serine protease inhibitor, putative C.G. S.X.
0.54 2e-95 349 Hordeum vulgare Contig1878_at Contig1878 - - 8e-1 At4g32960 unknown protein C.G. S.X.
0.04 2e-8 61 Populus trichocarpa PtpAffx.158814.1.S1_at CN519440 hypothetical protein - 3e-2 At3g45220 serpin, putative / serine protease inhibitor, putative C.G. S.X.
0.47 3e-105 383 Triticum aestivum Ta.9259.1.S1_at CD889812 - - 3e+0 At4g31430 unknown protein C.G. S.X.
0.06 9e-4 44 Vitis vinifera 1607683_at CF207162 hypothetical protein LOC100266122 - 2e-5 At1g47710 serpin, putative / serine protease inhibitor, putative C.G. S.X.
0.40 2e-73 276 Zea mays Zm.10471.1.A1_at CA399504 protein Z - 8e-1 At5g12340 unknown protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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