CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os03g0566900

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.50 68.0 Os03g0566900 NM_184753.1 - - 1e+0 At3g11600 unknown protein S.X. H.G.
0.55 73.7 Os07g0193500 9635.m00920 - - 1e+1 At5g07600 oleosin / glycine-rich protein S.X. H.G.
0.50 68.0 Os05g0482100 9633.m03765 - - 1e-3 At2g29590 thioesterase family protein S.X. H.G.
0.50 68.0 Os04g0426800 9632.m03343 - - 1e+0 At4g23950 - S.X. H.G.
0.50 68.0 Os01g0138700 9629.m00379 - - 2e+0 At1g56630 triacylglycerol lipase S.X. H.G.
0.47 62.3 Os01g0343400 9629.m02325 - - 1e+0 At3g29575 AFP3 (ABI FIVE BINDING PROTEIN 3) S.X. H.G.
0.43 55.4 Os01g0590300 AK063740.1 - Conserved hypothetical protein 2e+0 At2g46505 SDH4 S.X. H.G.
0.40 51.1 Os06g0528000 NM_196265.1 - - 1e+0 At5g52570 BETA-OHASE 2 (BETA-CAROTENE HYDROXYLASE 2) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
124.0 100.0 GSM422674 Musa_DNA_RICE GSE16865 Heterologous microarrays for the study of drought stress in Musa
30.8 99.7 GSM422676 Control GSE16865 Heterologous microarrays for the study of drought stress in Musa
25.8 99.5 GSM377081 Genomic DNA - 45 day old leaf sample - mutant g7534 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
22.8 99.3 GSM377078 Genomic DNA - 45 day old leaf sample - mutant g6603 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
21.5 99.2 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
18.7 99.0 GSM377085 Genomic DNA - 45 day old leaf sample - mutant f2045 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
18.3 98.9 GSM377086 Genomic DNA - 45 day old leaf sample - IR64 wtcheck GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
17.9 98.9 GSM377073 Genomic DNA - 45 day old leaf sample - mutant d2943 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
17.2 98.8 GSM377077 Genomic DNA - 45 day old leaf sample - mutant g6489 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
15.4 98.7 GSM377080 Genomic DNA - 45 day old leaf sample - mutant g6728 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.06 4e-2 38 Os05g0299100 9633.m02074 - Hypothetical protein 4e-3 At3g25070 RIN4 (RPM1 INTERACTING PROTEIN 4) C.G. S.X.
0.05 3e+0 32 Os11g0282000 9639.m01648 - - 6e-3 At3g18540 unknown protein C.G. S.X.
0.04 7e-1 34 Os02g0720400 9630.m04768 - Uncharacterized plant-specific protein DUF506domain containing protein 2e+0 At2g03770 sulfotransferase family protein C.G. S.X.
0.03 7e-1 34 Os02g0766600 AK059779.1 - Conserved hypothetical protein 5e-1 At1g55210 disease resistance response C.G. S.X.
0.02 7e-1 34 Os05g0482400 AK109526.1 - Cytochrome P450 family protein 1e-6 At5g24910 CYP714A1 C.G. S.X.
0.02 7e-1 34 Os06g0315900 AK100030.1 - The start codon is not identified. 2e-1 At3g50140 unknown protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.06 1e+0 32 Arabidopsis thaliana At3g11600 820333 unknown protein F:molecular_function unknown;P:biological_process unknown;C:unknown;P - - - C.G. S.X.
0.05 2e+0 32 Glycine max Gma.7301.2.S1_at BE346680 - - 2e-4 At4g29210 GGT4 (GAMMA-GLUTAMYL TRANSPEPTIDASE 4) C.G. S.X.
0.04 7e-1 32 Hordeum vulgare Contig8178_at Contig8178 - - 5e-3 At2g41905 unknown protein C.G. S.X.
0.07 7e+0 30 Populus trichocarpa PtpAffx.61275.1.A1_at DN486703 - - 6e-1 At4g09270 unknown protein C.G. S.X.
0.05 4e-1 34 Triticum aestivum TaAffx.51584.1.S1_at CA723349 - - 5e-2 At5g26667 PYR6 C.G. S.X.
0.04 6e+0 28 Vitis vinifera 1622163_at CF213126 hypothetical protein LOC100243346 - 7e-5 At4g23800 high mobility group (HMG1/2) family protein C.G. S.X.
0.04 6e-1 32 Zea mays Zm.1004.1.S1_at BE511241 - - 2e+0 At5g37200 zinc finger (C3HC4-type RING finger) family protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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