CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os03g0435200

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.57 77.0 Os03g0435200 AK120095.1 - TPR-like domain containing protein 2e-3 At4g39952 pentatricopeptide (PPR) repeat-containing protein S.X. H.G.
0.56 76.3 Os06g0128400 AK064390.1 - The stop codon is not identified. 7e-29 At3g56990 EDA7 (embryo sac development arrest 7) S.X. H.G.
0.50 68.0 Os06g0314000 AK064443.1 - Plant protein of unknown function DUF827 familyprotein 6e-2 At1g77700 pathogenesis-related thaumatin family protein S.X. H.G.
0.42 53.9 Os09g0479000 9637.m02691 - F-box protein interaction domain containingprotein 8e-1 At1g67260 TCP1 S.X. H.G.
0.30 32.7 Os01g0513500 AK108600.1 - Hypothetical protein 8e-1 At4g05632 unknown protein S.X. H.G.
0.10 5.7 Os02g0675900 9630.m04397 - - 2e+0 At3g54150 embryo-abundant protein-related S.X. H.G.
Click here to hide the above table.

Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
101.5 100.0 GSM422676 Control GSE16865 Heterologous microarrays for the study of drought stress in Musa
33.8 99.8 GSM377072 Genomic DNA - 45 day old leaf sample - mutant d1137 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
27.8 99.6 GSM377075 Genomic DNA - 45 day old leaf sample - mutant g650 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
25.9 99.5 GSM377073 Genomic DNA - 45 day old leaf sample - mutant d2943 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
22.9 99.3 GSM377084 Genomic DNA - 45 day old leaf sample - mutant f1856 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
18.8 99.0 GSM377071 Genomic DNA - 45 day old leaf sample - mutant d256 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
17.0 98.8 GSM377080 Genomic DNA - 45 day old leaf sample - mutant g6728 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
15.4 98.7 GSM377076 Genomic DNA - 45 day old leaf sample - mutant g6485 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
14.9 98.6 GSM377077 Genomic DNA - 45 day old leaf sample - mutant g6489 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
14.8 98.6 GSM377078 Genomic DNA - 45 day old leaf sample - mutant g6603 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
Click here to hide the above table.

Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.07 4e-14 81 Os02g0180500 AK101220.1 - Chorismate mutase CM2 (EC 5.4.99.5) (Chorimatemutase) 2e-1 At2g36410 unknown protein C.G. S.X.
0.06 2e-10 69 Os07g0485500 AK121068.1 - Protein of unknown function DUF6 domain containingprotein 7e-1 At4g19270 unknown protein C.G. S.X.
0.04 2e-32 143 Os04g0531800 AK121355.1 - Hypothetical protein 1e-1 At3g53080 galactose-binding lectin family protein C.G. S.X.
0.04 3e-18 95 Os07g0558500 AK064914.1 - Inositol phosphatase-like protein 1e-2 At2g20890 PSB29 C.G. S.X.
0.04 4e-18 95 Os10g0464000 AK103475.1 - Hypersensitive-induced response protein 2e-22 At5g62740 band 7 family protein C.G. S.X.
0.04 1e-14 83 Os02g0158200 9630.m00564 - - 4e-1 At3g44380 - C.G. S.X.
0.04 3e-12 75 Os03g0250200 AK058393.1 - Pathogenicity protein PATH531-like protein 1e-5 At1g75700 HVA22G (HVA22-LIKE PROTEIN G) C.G. S.X.
0.04 7e-10 67 Os11g0131800 9639.m00280 - Hypothetical protein 2e-1 At3g44380 - C.G. S.X.
0.03 7e-13 77 Os03g0701400 AK120400.1 - Conserved hypothetical protein 1e+0 At5g47220 ERF2 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 2) C.G. S.X.
0.01 4e-9 65 Os10g0546300 AK103033.1 - Conserved hypothetical protein 1e-13 At2g27900 unknown protein C.G. S.X.
Click here to hide the above table.

Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.01 2e-3 46 Arabidopsis thaliana At4g39952 830155 pentatricopeptide (PPR) repeat-containing protein F:binding;P:biological_process unknown;C:cellular_component unknown;POMFBA - - - C.G. S.X.
0.01 6e-1 38 Glycine max GmaAffx.75243.1.S1_at BI321819 - - 3e+0 At1g53990 GLIP3 C.G. S.X.
0.01 9e-1 36 Hordeum vulgare HA30P04r_x_at HA30P04r - - 4e+0 At5g36130 cytochrome P450 family C.G. S.X.
0.01 2e-1 40 Populus trichocarpa PtpAffx.210743.1.S1_at pmrna21074 hypothetical protein - 3e-3 At1g11290 CRR22 (CHLORORESPIRATORY REDUCTION22) C.G. S.X.
0.01 1e-1 40 Triticum aestivum TaAffx.107405.1.S1_at CA700262 - - 2e+0 At1g70895 CLE17 (CLAVATA3/ESR-RELATED 17) C.G. S.X.
0.01 1e-1 38 Vitis vinifera 1621483_at BQ796003 hypothetical protein LOC100254964 - 2e-6 At1g12810 proline-rich family protein C.G. S.X.
0.01 2e-1 38 Zea mays Zm.17499.1.A1_at CK145371 hypothetical protein LOC100279269 - 3e-1 At2g03230 - C.G. S.X.
Click here to hide the above table.

Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
Click here to hide the above table.

Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
Click here to hide the above table.

Back to the CoP portal site

Back to the KAGIANA project homepage