CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os03g0424600

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.71 89.6 Os03g0424600 AK101882.1 - Conserved hypothetical protein 4e-1 At3g22820 allergen-related S.X. H.G.
0.67 87.2 Os10g0145200 AK103298.1 - Cyclin-like F-box domain containing protein 7e-1 At2g37640 EXP3 S.X. H.G.
0.60 79.7 Os02g0127600 9630.m00255 - TPR-like domain containing protein 2e+0 At5g40710 zinc finger (C2H2 type) family protein S.X. H.G.
0.33 38.8 Os10g0484400 AK107124.1 - Ribosomal protein L18P/L5E family protein 3e-1 At3g22450 structural constituent of ribosome S.X. H.G.
0.31 34.5 Os06g0526700 9634.m03145 - Protein phosphatase 2C-like domain containingprotein 2e-6 At5g53140 protein phosphatase 2C, putative / PP2C, putative S.X. H.G.
0.22 19.4 Os03g0752200 CR287940 - AtSPO11-1 2e-6 At3g13170 ATSPO11-1 S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
40.1 99.9 GSM377075 Genomic DNA - 45 day old leaf sample - mutant g650 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
31.4 99.7 GSM377078 Genomic DNA - 45 day old leaf sample - mutant g6603 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
30.2 99.7 GSM377084 Genomic DNA - 45 day old leaf sample - mutant f1856 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
28.4 99.6 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
27.7 99.6 GSM377072 Genomic DNA - 45 day old leaf sample - mutant d1137 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
25.1 99.5 GSM377073 Genomic DNA - 45 day old leaf sample - mutant d2943 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
22.7 99.3 GSM377071 Genomic DNA - 45 day old leaf sample - mutant d256 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
21.8 99.2 GSM377081 Genomic DNA - 45 day old leaf sample - mutant g7534 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
21.3 99.2 GSM377080 Genomic DNA - 45 day old leaf sample - mutant g6728 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
21.0 99.2 GSM377074 Genomic DNA - 45 day old leaf sample - mutant g282 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.69 0 2714 Os08g0208700 AK068849.1 - - 2e+0 At5g66410 PLP3b (Phosducin-like protein 3 homolog) C.G. S.X.
0.05 4e-36 155 Os12g0152800 AK072885.1 - Dual specificity protein phosphatase familyprotein 4e-1 At1g68640 PAN (PERIANTHIA) C.G. S.X.
0.03 1e-36 157 Os12g0152900 AK101620.1 - Basic-leucine zipper (bZIP) transcription factordomain containing protein 5e-3 At1g08320 bZIP family transcription factor C.G. S.X.
0.01 3e-3 46 Os02g0744900 AK098873.1 - Geranylgeranyl hydrogenase 6e-5 At1g74470 geranylgeranyl reductase C.G. S.X.
0.01 2e-1 40 Os09g0281600 AK067020.1 - SWAP/Surp domain containing protein 6e-12 At3g52120 SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / D111/G-patch domain-containing protein C.G. S.X.
0.01 2e-1 40 Os11g0639000 CA756597 - Conserved hypothetical protein 3e+0 At5g67390 unknown protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.01 4e-1 38 Arabidopsis thaliana At3g22820 821853 allergen-related F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P - - - C.G. S.X.
0.01 5e-1 38 Glycine max GmaAffx.34283.1.S1_at AI938799 - - 1e-2 At2g35430 zinc finger (CCCH-type) family protein C.G. S.X.
0.01 3e+0 34 Hordeum vulgare HA18M18r_x_at HA18M18r - - 1e+0 At3g13420 unknown protein C.G. S.X.
0.01 5e-1 38 Populus trichocarpa PtpAffx.66669.1.S1_s_at CK106999 hypothetical protein - 1e-12 At1g67720 leucine-rich repeat family protein / protein kinase family protein C.G. S.X.
0.02 6e+0 34 Triticum aestivum TaAffx.80159.1.S1_at CA700923 Cathepsin B - 4e+0 At5g22390 unknown protein C.G. S.X.
0.01 4e-1 36 Vitis vinifera 1617143_at CD006508 - - 3e-1 At5g66460 (1-4)-beta-mannan endohydrolase, putative C.G. S.X.
0.01 6e-1 36 Zea mays Zm.12249.1.A1_at AI738004 - - 5e-8 At3g55010 PUR5 C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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