Gene omics information

Query gene ID Os03g0341000
Gene name
Organism Oryza sativa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.5068.0Os03g0341000AK111414.1-AP2 domain containing protein RAP2.2 (Fragment)6e-4At4g17490ATERF6 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 6)S.X.H.G.
0.7793.1Os07g0604600AK062832.1-B12D family protein2e-2At1g06475unknown proteinS.X.H.G.
0.7189.6Os03g0182800AY323478.1-Ethylene responsive element binding factor3(OsERF3)5e-2At2g44840ERF13 (ETHYLENE-RESPONSIVE ELEMENT BINDING FACTOR 13)S.X.H.G.
0.6787.2Os03g0226200U76031.1-Non-symbiotic hemoglobin 2 (rHb2) (ORYsa GLB1b)8e+0At5g02200FHL (FAR-RED-ELONGATED HYPOCOTYL1-LIKE)S.X.H.G.
0.6382.7Os01g0185500NM_189612.1-RmlC-like cupin family protein9e-2At5g39890unknown proteinS.X.H.G.
0.5777.0Os03g0233900U76030.1-Non-symbiotic hemoglobin 1 (rHb1) (ORYsa GLB1a)2e+0At1g30260-S.X.H.G.
0.3644.0Os10g0464000AK103475.1-Hypersensitive-induced response protein2e-22At5g62740band 7 family proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
37.499.8GSM359903FL478 root, control, biological replicate 2GSE14403Root-specific transcriptional profiling of contrasting rice genotypes in response to salinity stress
34.299.8GSM359902FL478 root, control, biological replicate 1GSE14403Root-specific transcriptional profiling of contrasting rice genotypes in response to salinity stress
29.499.7GSM359922Pokkali root, salt-treated, biological replicate 1GSE14403Root-specific transcriptional profiling of contrasting rice genotypes in response to salinity stress
26.799.6GSM359915IR63731 root, control, biological replicate 3GSE14403Root-specific transcriptional profiling of contrasting rice genotypes in response to salinity stress
21.899.2GSM359904FL478 root, control, biological replicate 3GSE14403Root-specific transcriptional profiling of contrasting rice genotypes in response to salinity stress
20.899.2GSM359923Pokkali root, salt-treated, biological replicate 2GSE14403Root-specific transcriptional profiling of contrasting rice genotypes in response to salinity stress
19.899.1GSM431927Root- -Fe+P biological rep1GSE17245Transcriptome analysis of iron and phosphorus interaction in rice seedlings
16.898.8GSM359914IR63731 root, control, biological replicate 2GSE14403Root-specific transcriptional profiling of contrasting rice genotypes in response to salinity stress
16.798.8GSM359908IR29 root, control, biological replicate 1GSE14403Root-specific transcriptional profiling of contrasting rice genotypes in response to salinity stress
15.598.7GSM359920Pokkali root, control, biological replicate 2GSE14403Root-specific transcriptional profiling of contrasting rice genotypes in response to salinity stress
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.177e-70266Os07g0674800AY297447.1-AP2 domain containing protein RAP2.2 (Fragment)8e-3At4g17500ATERF-1 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1)C.G.S.X.
0.147e-33143Os05g0361700AK100184.1-Ethylene responsive element binding factor3(OsERF3)2e-3At1g04778unknown proteinC.G.S.X.
0.123e-44180Os01g0313300AK111775.1-Transcription factor EREBP12e-6At3g14230RAP2.2C.G.S.X.
0.127e-33143Os05g04371009633.m03366-Pathogenesis-related transcriptional factor andERF domain containing protein2e-6At1g43160RAP2.6 (related to AP2 6)C.G.S.X.
0.127e-33143Os10g0390800AK110269.1--2e-4At1g22985AP2 domain-containing transcription factor, putativeC.G.S.X.
0.101e-34149Os03g0183300AK058349.1-Pathogenesis-related transcriptional factor andERF domain containing protein4e+0At5g46873-C.G.S.X.
0.102e-30135Os12g0168100AK107125.1-AP2 domain containing protein RAP2.6 (Fragment)1e-5At1g43160RAP2.6 (related to AP2 6)C.G.S.X.
0.081e-28129Os08g0537900AK119425.1-AP2 domain containing protein RAP2.2 (Fragment)6e-12At1g52630unknown proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.046e-446Arabidopsis thalianaAt4g17490827463ATERF6 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 6)Encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family (ATERF-6). The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.---C.G.S.X.
0.099e-1375Glycine maxGmaAffx.93436.1.A1_s_atCF809161--4e-13At2g47520AP2 domain-containing transcription factor, putativeC.G.S.X.
0.124e-31135Hordeum vulgareContig2481_s_atContig2481--8e-6At1g43160RAP2.6 (related to AP2 6)C.G.S.X.
0.045e-550Populus trichocarpaPtpAffx.200385.1.S1_atpmrna770AP2/ERF domain-containing transcription factor-9e-13At4g11140CRF1 (CYTOKININ RESPONSE FACTOR 1)C.G.S.X.
0.197e-47188Triticum aestivumTaAffx.123327.1.S1_x_atCD937360--6e-3At1g71130AP2 domain-containing transcription factor, putativeC.G.S.X.
0.075e-548Vitis vinifera1609683_atCF604955hypothetical protein LOC100249982-2e-11At2g47520AP2 domain-containing transcription factor, putativeC.G.S.X.
0.131e-37157Zea maysZm.7459.1.A1_atAY105544.1Hypothetical protein LOC100193143-6e-1At2g44790UCC2 (UCLACYANIN 2)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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