CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os03g0337200

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.46 60.9 Os03g0337200 AK065446.1 - Hypothetical protein 1e-1 At1g28540 unknown protein S.X. H.G.
0.61 81.2 Os03g0240900 AK120108.1 - Tubulin/FtsZ, GTPase domain containing protein 4e-2 At1g19485 AT hook motif-containing protein S.X. H.G.
0.57 77.0 Os08g0485600 AK064883.1 - Zn-finger, C2H2 type domain containing protein 2e+0 At3g60420 - S.X. H.G.
0.53 71.3 Os06g0708100 AK102365.1 - Esterase/lipase/thioesterase domain containingprotein 7e-5 At5g15860 ATPCME (PRENYLCYSTEINE METHYLESTERASE) S.X. H.G.
0.53 71.3 Os04g0284500 AK119323.1 - Hypothetical protein 2e+0 At2g01540 C2 domain-containing protein S.X. H.G.
0.52 69.6 Os01g0310800 AK064374.1 - Pto kinase interactor 1 4e-7 At2g43230 serine/threonine protein kinase, putative S.X. H.G.
0.52 69.6 Os01g0310500 CB676638 - Hypothetical protein 4e-6 At2g30740 serine/threonine protein kinase, putative S.X. H.G.
0.47 62.3 Os10g0493100 AK063145.1 - Fertility restorer 6e+0 At5g25240 - S.X. H.G.
0.44 58.1 Os01g0263600 AK101040.1 - U5 snRNP-associated 102 kDa protein (U5-102 kDaprotein) 5e-29 At4g03430 EMB2770 (EMBRYO DEFECTIVE 2770) S.X. H.G.
0.42 53.9 Os12g0225300 AK121853.1 - FAR1 domain containing protein 7e-3 At5g63740 zinc finger protein-related S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
27.1 99.6 GSM377084 Genomic DNA - 45 day old leaf sample - mutant f1856 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
23.8 99.4 GSM377075 Genomic DNA - 45 day old leaf sample - mutant g650 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
23.1 99.3 GSM377073 Genomic DNA - 45 day old leaf sample - mutant d2943 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
22.5 99.3 GSM377071 Genomic DNA - 45 day old leaf sample - mutant d256 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
21.4 99.2 GSM377072 Genomic DNA - 45 day old leaf sample - mutant d1137 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
20.2 99.1 GSM377076 Genomic DNA - 45 day old leaf sample - mutant g6485 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
16.7 98.8 GSM377082 Genomic DNA - 45 day old leaf sample - mutant g9799 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
16.3 98.8 GSM377080 Genomic DNA - 45 day old leaf sample - mutant g6728 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
16.0 98.7 GSM377086 Genomic DNA - 45 day old leaf sample - IR64 wtcheck GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
15.4 98.7 GSM377077 Genomic DNA - 45 day old leaf sample - mutant g6489 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.52 0 712 Os01g0353900 AK063501.1 - Hypothetical protein 2e-2 At1g28540 unknown protein C.G. S.X.
0.28 0 680 Os03g0428000 AK062841.1 - Conserved hypothetical protein 3e-2 At1g28540 unknown protein C.G. S.X.
0.02 5e-8 61 Os05g0269000 CB666416 - Hypothetical protein 3e-2 At4g39890 AtRABH1c (Arabidopsis Rab GTPase homolog H1c) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.01 1e-1 40 Arabidopsis thaliana At1g28540 839754 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P - - - C.G. S.X.
0.01 2e+0 36 Glycine max GmaAffx.31898.1.S1_at AW100638 - - 6e-1 At4g23895 pleckstrin homology (PH) domain-containing protein-related C.G. S.X.
0.01 3e+0 34 Hordeum vulgare Contig26133_at Contig26133 - - 3e-2 At1g62400 HT1 (high leaf temperature 1) C.G. S.X.
0.01 5e-1 38 Populus trichocarpa PtpAffx.15423.1.A1_at CK094814 sodium proton exchanger - 3e-1 At3g48030 hypoxia-responsive family protein / zinc finger (C3HC4-type RING finger) family protein C.G. S.X.
0.01 6e+0 34 Triticum aestivum TaAffx.30276.1.S1_at CA626565 - - 1e+0 At4g16500 cysteine protease inhibitor family protein / cystatin family protein C.G. S.X.
0.01 2e+0 34 Vitis vinifera 1614688_at CF204022.1 - - 2e+0 At1g14315 - C.G. S.X.
0.01 7e-1 36 Zea mays Zm.5364.1.A1_at CF273142 - - 6e-6 At5g25510 serine/threonine protein phosphatase 2A (PP2A) regulatory subunit B', putative C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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