CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os03g0305700

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.67 87.2 Os03g0305700 AK073807.1 - Peptide chain release factor 2 5e-24 At1g56350 peptide chain release factor, putative S.X. H.G.
0.50 68.0 Os08g0378800 AK073371.1 - Sterile alpha motif homology 2 domain containingprotein 1e+0 At4g39330 CAD9 (CINNAMYL ALCOHOL DEHYDROGENASE 9) S.X. H.G.
0.44 58.1 Os11g0162000 AK069028.1 - Hypothetical protein 1e+0 At1g62760 invertase/pectin methylesterase inhibitor family protein S.X. H.G.
0.40 51.1 Os11g0423800 AK064691.1 - Mitochondrial basic amino acid carrier 4e-9 At2g33820 MBAC1 S.X. H.G.
0.33 38.8 Os01g0224400 AK064461.1 - Mitochondrial substrate carrier family protein 3e-3 At2g46320 mitochondrial substrate carrier family protein S.X. H.G.
0.32 36.3 Os01g0757800 AK067990.1 - UMUC-like DNA-repair protein family protein 8e-11 At5g44740 POLH (Y-FAMILT DNA POLYMERASE H) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
125.8 100.0 GSM422672 Drought GSE16865 Heterologous microarrays for the study of drought stress in Musa
7.5 97.5 GSM377081 Genomic DNA - 45 day old leaf sample - mutant g7534 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
7.1 97.4 GSM377073 Genomic DNA - 45 day old leaf sample - mutant d2943 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
6.9 97.3 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
6.6 97.3 GSM377085 Genomic DNA - 45 day old leaf sample - mutant f2045 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
6.4 97.2 GSM377082 Genomic DNA - 45 day old leaf sample - mutant g9799 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
6.2 97.1 GSM377084 Genomic DNA - 45 day old leaf sample - mutant f1856 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
5.6 96.9 GSM377075 Genomic DNA - 45 day old leaf sample - mutant g650 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
5.6 96.9 GSM377078 Genomic DNA - 45 day old leaf sample - mutant g6603 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
4.3 96.1 GSM377074 Genomic DNA - 45 day old leaf sample - mutant g282 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.01 1e-1 40 Os01g0867900 AK061366.1 - - 2e-19 At1g43130 LCV2 (LIKE COV 2) C.G. S.X.
0.01 1e-1 40 Os02g0199000 9630.m00977 - - 3e+0 At5g08180 ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein C.G. S.X.
0.01 1e-1 40 Os05g0437200 AK121867.1 - Protein of unknown function DUF502 family protein 4e-24 At1g43130 LCV2 (LIKE COV 2) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.29 5e-24 113 Arabidopsis thaliana At1g56350 842089 peptide chain release factor, putative F:translation release factor activity, codon specific, translation release factor activity;P:translational termination;C:cytoplasm;OBMFPV - - - C.G. S.X.
0.15 2e-5 52 Glycine max GmaAffx.35002.1.S1_at AW759742 - - 6e-3 At1g56350 peptide chain release factor, putative C.G. S.X.
0.37 6e-164 577 Hordeum vulgare Contig17141_at Contig17141 - - 1e-26 At1g56350 peptide chain release factor, putative C.G. S.X.
0.26 8e-36 153 Populus trichocarpa PtpAffx.210857.1.S1_at pmrna21321 hypothetical protein - 1e-38 At1g56350 peptide chain release factor, putative C.G. S.X.
0.31 2e-97 357 Triticum aestivum Ta.6868.3.S1_at BQ483890 - - 1e+0 At2g45130 SPX3 (SPX DOMAIN GENE 3) C.G. S.X.
0.02 1e+0 34 Vitis vinifera 1622308_at CF210289 hypothetical protein LOC100263876 - 4e+0 At4g18425 unknown protein C.G. S.X.
0.19 7e-83 307 Zea mays Zm.4714.1.A1_at AI738144 peptide chain release factor 2 - 3e-14 At1g56350 peptide chain release factor, putative C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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