Gene omics information

Query gene ID Os03g0293400
Gene name
Organism Oryza sativa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.8094.6Os03g0293400AK058372.1-Aprataxin (Forkhead-associated domainhistidine-triad like protein) (FHA-HIT). Splice isoform 61e-8At5g01310basic helix-loop-helix (bHLH) family proteinS.X.H.G.
0.5573.7Os02g0290500AK065628.1-Ubiquitin domain containing protein2e-9At1g64460phosphatidylinositol 3- and 4-kinase family proteinS.X.H.G.
0.4355.4Os01g0172200AK100326.1-WW/Rsp5/WWP domain containing protein1e-7At3g01540DRH1 (DEAD BOX RNA HELICASE 1)S.X.H.G.
0.4355.4Os12g0288600AK064558.1-Hypothetical protein3e-1At5g63350unknown proteinS.X.H.G.
0.3846.9Os12g0116000AK102691.1-PV723e-23At3g52850VSR1 (VACUOLAR SORTING RECEPTOR HOMOLOG 1)S.X.H.G.
0.2625.6Os06g0529800AK071835.1-Zn-finger (putative), N-recognin domain containingprotein6e-5At4g23860PHD finger protein-relatedS.X.H.G.
0.2422.4Os04g0641000AK121416.1-RNA polymerase beta subunit domain containingprotein2e-22At3g23780NRPD2AS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
9.097.8GSM195223Ovary 3, biological rep 3GSE7951Genome-wide gene expression profiling of rice stigma
8.697.8GSM159187SAM, biological rep 2GSE6893Expression data for reproductive development in rice
8.597.7GSM195221Ovary 1, biological rep 1GSE7951Genome-wide gene expression profiling of rice stigma
8.497.7GSM4094319311_young panicle 2cm, biological rep2GSE16265SNEP: Simultaneous detection of nucleotide and expression polymorphisms using Affymetrix GeneChip
8.397.7GSM4094329311_young panicle 2cm, biological rep3GSE16265SNEP: Simultaneous detection of nucleotide and expression polymorphisms using Affymetrix GeneChip
8.397.7GSM4094309311_young panicle 2cm, biological rep1GSE16265SNEP: Simultaneous detection of nucleotide and expression polymorphisms using Affymetrix GeneChip
7.997.6GSM429983Rice mutant phoenix (pho) panicle rep1GSE17194Genome-wide gene expression profiling of rice Indica cultivar Zhongxian 3037 and mutant phoenix (pho) panicle
7.797.6GSM409427Nipponbare_young panicle 2cm, biological rep3GSE16265SNEP: Simultaneous detection of nucleotide and expression polymorphisms using Affymetrix GeneChip
7.097.4GSM159186SAM, biological rep 1GSE6893Expression data for reproductive development in rice
6.997.3GSM4094339311_young panicle 2cm, biological rep4GSE16265SNEP: Simultaneous detection of nucleotide and expression polymorphisms using Affymetrix GeneChip
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.016e-344Os04g06766509632.m05666--1e-5At3g26790FUS3 (FUSCA 3)C.G.S.X.
0.012e-242Os04g0676600AK072874.1-Transcriptional factor B3 family protein1e-3At1g28300LEC2 (LEAFY COTYLEDON 2)C.G.S.X.
0.019e-240Os05g0573000AK066560.1-Hypothetical protein4e-1At3g09730unknown proteinC.G.S.X.
0.013e-138Os03g0167600AK121254.1-Male sterility protein 29e-14At3g11980MS2 (MALE STERILITY 2)C.G.S.X.
0.011e+036Os01g01274009629.m00282-Myb, DNA-binding domain containing protein1e+0At3g01140MYB106 (myb domain protein 106)C.G.S.X.
0.011e+036Os05g0144800AK099724.1-TFIIH basal transcription factor complex helicasesubunit (EC 3.6.1.-) (DNA-repair protein complementingXP-D cells) (Xeroderma pigmentosum group D complementingprotein) (CXPD) (DNA excision repair protein ERCC-2)3e-38At1g03190UVH6 (ULTRAVIOLET HYPERSENSITIVE 6)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.061e-861Arabidopsis thalianaAt5g01310830940basic helix-loop-helix (bHLH) family proteinF:transcription factor activity;P:regulation of transcription;C:intracellular, nucleus, chloroplast;PMFBOV---C.G.S.X.
0.022e-138Glycine maxGmaAffx.14911.1.S1_atBQ612072--2e+0At3g25480rhodanese-like domain-containing proteinC.G.S.X.
0.435e-111400Hordeum vulgareContig16120_atContig16120--4e-7At5g01310basic helix-loop-helix (bHLH) family proteinC.G.S.X.
0.102e-138Populus trichocarpaPtpAffx.213638.1.S1_atpmrna26644hypothetical protein-1e-9At5g01310basic helix-loop-helix (bHLH) family proteinC.G.S.X.
0.167e-32139Triticum aestivumTaAffx.108136.1.S1_atCA691304--4e+0At1g63600protein kinase-relatedC.G.S.X.
0.028e-134Vitis vinifera1621938_x_atCF201198.1--1e+0At5g62350invertase/pectin methylesterase inhibitor family protein / DC 1.2 homolog (FL5-2I22)C.G.S.X.
0.023e-136Zea maysZm.8089.1.S1_atBM072889hypothetical protein LOC100274015-5e-1At5g25900GA3 (GA REQUIRING 3)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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