Gene omics information

Query gene ID Os03g0270000
Gene name
Organism Oryza sativa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6281.5Os03g0270000AK106069.1-Protein of unknown function DUF296 domaincontaining protein3e-3At1g76500SOB3 (SUPPRESSOR OF PHYB-4#3)S.X.H.G.
0.3236.3Os01g0797600AK069262.1-Ethylene responsive element binding factor3(OsERF3)9e-9At5g44210ERF9 (ERF DOMAIN PROTEIN 9)S.X.H.G.
0.2931.1Os02g0766700AK072062.1-Abscisic acid responsive elements-binding factor(ABA-responsive element binding protein 2) (AREB2)6e-5At2g36270ABI5 (ABA INSENSITIVE 5)S.X.H.G.
0.2727.5Os01g0667900AK105335.1-Glutaredoxin domain containing protein2e+0At4g38140zinc finger (C3HC4-type RING finger) family proteinS.X.H.G.
0.2727.5Os01g0159300AK073728.1-Zn-finger, RING domain containing protein1e+0At3g61370unknown proteinS.X.H.G.
0.2625.6Os05g0569300AK065440.1-G-box binding factor 12e-1At2g47530-S.X.H.G.
0.2625.6Os05g0542200AK071306.1-Epoxide hydrolase family protein7e-2At5g53050hydrolase, alpha/beta fold family proteinS.X.H.G.
0.2321.2Os07g0685700AB074972.1-Ethylene insensitive 3 family protein2e-2At1g56170NF-YC2 (NUCLEAR FACTOR Y, SUBUNIT C2)S.X.H.G.
0.2117.9Os01g0777200NM_191475.1-Peptidase A1, pepsin family protein6e-2At2g36670aspartyl protease family proteinS.X.H.G.
0.094.9Os02g0712500AK111115.1-Conserved hypothetical protein2e+0At1g04330unknown proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
15.098.6GSM173080Rice MH63 Control2GSE7197Down-regulation of OsSRT1 induces DNA ´╗┐fragmentation and cell death in rice
13.798.5GSM278855KT95-418-non-infected, biological rep3GSE11025Comparative transcriptional profiling of two contrasting rice genotypes in response to rice stripe virus infection
12.698.4GSM173089Rice MH63 Control3GSE7197Down-regulation of OsSRT1 induces DNA ´╗┐fragmentation and cell death in rice
11.398.2GSM159173Rice coleoptiles, 4 days old, aerobic, replicate N.2 (sample#10)GSE6908Transcript Profiling of the Aerobic and Anoxic Rice Coleoptile
10.698.1GSM278853KT95-418-non-infected, biological rep1GSE11025Comparative transcriptional profiling of two contrasting rice genotypes in response to rice stripe virus infection
10.398.1GSM173086Rice MH63 Control1GSE7197Down-regulation of OsSRT1 induces DNA ´╗┐fragmentation and cell death in rice
9.397.9GSM159271Rice coleoptiles, 4 days old, anoxic, REPLICATE 1 (Sample #11)GSE6908Transcript Profiling of the Aerobic and Anoxic Rice Coleoptile
9.097.8GSM159262Drought stress, biological rep 1GSE6901Expression data for stress treatment in rice seedlings
8.797.8GSM159264Drought stress, biological rep 3GSE6901Expression data for stress treatment in rice seedlings
8.697.8GSM159263Drought stress, biological rep 2GSE6901Expression data for stress treatment in rice seedlings
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.232e-30135Os02g08208009630.m05730-Protein of unknown function DUF296 domaincontaining protein3e-2At4g14465DNA-binding protein-relatedC.G.S.X.
0.213e-35151Os08g0563200AK110263.1-Protein of unknown function DUF296 domaincontaining protein2e-1At1g76500SOB3 (SUPPRESSOR OF PHYB-4#3)C.G.S.X.
0.183e-1791Os02g07137009630.m04710-Protein of unknown function DUF296 domaincontaining protein3e+0At5g03240UBQ3 (POLYUBIQUITIN 3)C.G.S.X.
0.172e-1171Os02g04480009630.m02338-Protein of unknown function DUF296 domaincontaining protein8e-6At4g22810DNA-binding protein-relatedC.G.S.X.
0.136e-1273Os08g0159700AK109080.1-Protein of unknown function DUF296 domaincontaining protein6e-1At2g41225unknown proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.023e-344Arabidopsis thalianaAt1g76500843983SOB3 (SUPPRESSOR OF PHYB-4#3)Encodes an AT hook domain containing protein. Identified in a screen of activation tagged lines that suppress the long-hypocotyl phenotype of a weak phyB allele. Affects cell elongation in the hypocotyl and leaves.Acts redundantly with ESC to modulate hypocotyl growth inhibition in response to light---C.G.S.X.
0.101e-346Glycine maxGmaAffx.38693.1.S1_atAW349908--1e-8At4g17800DNA-binding protein-relatedC.G.S.X.
0.309e-82303Hordeum vulgareContig23110_atContig23110--1e+0At4g38000Dof-type zinc finger domain-containing proteinC.G.S.X.
0.036e-240Populus trichocarpaPtpAffx.211416.1.S1_atpmrna22372AP2 domain-containing transcription factor-5e-71At4g37750ANT (AINTEGUMENTA)C.G.S.X.
0.272e-84313Triticum aestivumTaAffx.16883.1.S1_atCA660700--4e+0At1g0110060S acidic ribosomal protein P1 (RPP1A)C.G.S.X.
0.028e-134Vitis vinifera1617166_s_atCA808041ripening-related protein-like-4e-1At1g54410dehydrin family proteinC.G.S.X.
0.032e-240Zea maysZm.7591.1.A1_atCK347203--2e+0At1g26945KDR (KIDARI)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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