CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os03g0267100

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.97 99.9 Os03g0267100 AK120655.1 - Conserved hypothetical protein 6e-16 At3g46230 ATHSP17.4 S.X. H.G.
0.50 68.0 Os02g0530001 9630.m03111 - - 2e+0 At3g62990 unknown protein S.X. H.G.
0.49 64.4 Os02g0795200 AK059349.1 - Conserved hypothetical protein 6e-1 At1g10140 - S.X. H.G.
0.47 62.3 Os01g0668700 AK067957.1 - Conserved hypothetical protein 6e+0 At5g05690 CPD (CONSTITUTIVE PHOTOMORPHOGENIC DWARF) S.X. H.G.
0.44 58.1 Os06g0110400 9634.m04646 - - 3e+1 At5g09370 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein S.X. H.G.
0.42 53.9 Os11g0639100 9639.m03865 - Hypothetical protein 4e-1 At4g09000 14-3-3-like protein GF14 chi / general regulatory factor 1 (GRF1) S.X. H.G.
0.42 53.9 Os08g0542800 AK121466.1 - Conserved hypothetical protein 3e-7 At1g07710 ankyrin repeat family protein S.X. H.G.
0.41 52.4 Os04g0502100 AK066956.1 - Conserved hypothetical protein 3e-1 At4g32290 unknown protein S.X. H.G.
0.41 52.4 Os04g0168100 9632.m00777 - Zn-finger, C2H2 type domain containing protein 7e-3 At2g42410 ZFP11 (ZINC FINGER PROTEIN 11) S.X. H.G.
0.40 51.1 Os04g0632400 AK068530.1 - - 1e-1 At1g76130 AMY2 (ALPHA-AMYLASE-LIKE 2) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
91.7 100.0 GSM422676 Control GSE16865 Heterologous microarrays for the study of drought stress in Musa
53.9 99.9 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
49.9 99.9 GSM422672 Drought GSE16865 Heterologous microarrays for the study of drought stress in Musa
24.8 99.5 GSM377073 Genomic DNA - 45 day old leaf sample - mutant d2943 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
20.2 99.1 GSM377071 Genomic DNA - 45 day old leaf sample - mutant d256 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
19.2 99.0 GSM377084 Genomic DNA - 45 day old leaf sample - mutant f1856 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
19.0 99.0 GSM377085 Genomic DNA - 45 day old leaf sample - mutant f2045 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
18.4 99.0 GSM377075 Genomic DNA - 45 day old leaf sample - mutant g650 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
18.3 98.9 GSM377082 Genomic DNA - 45 day old leaf sample - mutant g9799 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
14.5 98.6 GSM377080 Genomic DNA - 45 day old leaf sample - mutant g6728 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.26 0 1267 Os03g0267200 AK069547.1 - - 7e-9 At5g59720 HSP18.2 (heat shock protein 18.2) C.G. S.X.
0.15 3e-155 551 Os03g0266900 D12635.1 - Low molecular mass heat shock protein Oshsp17.3 7e-12 At1g53540 17.6 kDa class I small heat shock protein (HSP17.6C-CI) (AA 1-156) C.G. S.X.
0.13 2e-162 575 Os03g0266300 AB110191.1 - Heat shock protein Hsp20 domain containing protein 4e-11 At5g59720 HSP18.2 (heat shock protein 18.2) C.G. S.X.
0.13 1e-135 486 Os03g0267000 AU165294 - Low molecular mass heat shock protein Oshsp18.0 6e-3 At5g59720 HSP18.2 (heat shock protein 18.2) C.G. S.X.
0.07 2e-76 289 Os05g0397300 AK062621.1 - Conserved hypothetical protein 1e+0 At5g28610 - C.G. S.X.
0.06 5e-98 361 Os11g0142400 AK067423.1 - Strictosidine synthase family protein 1e-2 At2g41290 strictosidine synthase family protein C.G. S.X.
0.06 2e-73 280 Os08g0483200 AK068161.1 - - 2e-3 At2g23320 WRKY15 C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.06 6e-16 87 Arabidopsis thaliana At3g46230 823768 ATHSP17.4 member of the class I small heat-shock protein (sHSP) family, which accounts for the majority of sHSPs in maturing seeds - - - C.G. S.X.
0.03 1e-14 83 Glycine max GmaAffx.72688.1.S1_at BG363535 - - 2e-13 At1g07400 17.8 kDa class I heat shock protein (HSP17.8-CI) C.G. S.X.
0.13 3e-121 436 Hordeum vulgare Contig2006_s_at Contig2006 - - 4e-26 At3g46230 ATHSP17.4 C.G. S.X.
0.03 5e-8 61 Populus trichocarpa PtpAffx.46615.1.S1_at CV277944 hypothetical protein - 9e-2 At1g59860 17.6 kDa class I heat shock protein (HSP17.6A-CI) C.G. S.X.
0.13 3e-135 484 Triticum aestivum Ta.27661.1.S1_at AJ614980 heat shock protein 16.9 - 5e-19 At3g46230 ATHSP17.4 C.G. S.X.
0.06 4e-8 59 Vitis vinifera 1616145_a_at BQ794473 hypothetical protein LOC100261583 - 1e-3 At1g53540 17.6 kDa class I small heat shock protein (HSP17.6C-CI) (AA 1-156) C.G. S.X.
0.13 2e-106 387 Zea mays Zm.2361.1.A1_at BM381388 hypothetical protein LOC100191552 - 3e-17 At1g53540 17.6 kDa class I small heat shock protein (HSP17.6C-CI) (AA 1-156) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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