CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os03g0263700

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.97 99.9 Os03g0263700 AK071748.1 - Conserved hypothetical protein 5e+0 At5g06020 self-incompatibility protein-related S.X. H.G.
0.77 93.1 Os02g0628800 AK058725.1 - Ubiquitin-like protein 5 2e-30 At3g45180 ubiquitin family protein S.X. H.G.
0.58 77.0 Os01g0550300 AK106151.1 - Conserved hypothetical protein 2e-22 At3g06720 IMPA-1 (IMPORTIN ALPHA ISOFORM 1) S.X. H.G.
0.56 76.3 Os02g0119400 AK102774.1 - Syntaxin 52 (AtSYP52) 4e-11 At1g79590 SYP52 (SYNTAXIN OF PLANTS 52) S.X. H.G.
0.52 69.6 Os07g0512200 CF292921 - Symbiosis-related like protein 2e-40 At4g21980 APG8A (AUTOPHAGY 8A) S.X. H.G.
0.48 63.7 Os09g0512900 AK104595.1 - Conserved hypothetical protein 7e-19 At5g11680 unknown protein S.X. H.G.
0.48 63.7 Os01g0930400 BI812278 - K+ potassium transporter family protein 4e-7 At4g13420 HAK5 (HIGH AFFINITY K+ TRANSPORTER 5) S.X. H.G.
0.46 60.9 Os02g0792900 AK068367.1 - TMS membrane protein/tumour differentiallyexpressed protein family protein 1e-15 At1g16180 TMS membrane family protein / tumour differentially expressed (TDE) family protein S.X. H.G.
0.46 60.9 Os01g0707300 AK104463.1 - Vesicle transport v-SNARE family protein 6e-7 At3g29100 VTI13 S.X. H.G.
0.44 58.1 Os03g0795800 AU101730 - Protein of unknown function UPF0005 family protein 7e+0 At4g19700 RING S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
6.3 97.2 GSM159207 Seed (S1, 0 - 2 dap), biological rep 1 GSE6893 Expression data for reproductive development in rice
5.8 97.0 GSM159208 Seed (S1, 0 - 2 dap), biological rep 2 GSE6893 Expression data for reproductive development in rice
5.2 96.7 GSM159209 Seed (S1, 0 - 2 dap), biological rep 3 GSE6893 Expression data for reproductive development in rice
3.5 95.3 GSM174889 H FR13 4 dpi rep 2 with array type rice from Affymetrix GSE7256 Identification of rice genes differentially expressed upon virulent infection by Magnaporthe grisea
3.5 95.3 GSM174886 F FR13 4 dpi rep 1 with array type rice from Affymetrix GSE7256 Identification of rice genes differentially expressed upon virulent infection by Magnaporthe grisea
3.4 95.2 GSM100446 Rice Bala 1ppm Arsenate Rep2 GSE4471 Expression data from rice varieties Azucena and Bala grown in 0 and 1ppm arsenate
3.3 95.1 GSM431926 Root- +Fe+P biological rep2 GSE17245 Transcriptome analysis of iron and phosphorus interaction in rice seedlings
3.0 94.6 GSM278850 KT95-418-RSV infected, biological rep1 GSE11025 Comparative transcriptional profiling of two contrasting rice genotypes in response to rice stripe virus infection
3.0 94.6 GSM159213 Seed (S3, 5 - 10 dap), biological rep 1 GSE6893 Expression data for reproductive development in rice
2.9 94.5 GSM159184 Y Leaf, biological rep 2 GSE6893 Expression data for reproductive development in rice
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.05 2e-1 38 Os06g0546800 9632.m00843 - - 2e+0 At4g19270 unknown protein C.G. S.X.
0.02 4e-2 40 Os01g0132500 CB667262 - Conserved hypothetical protein 4e-1 At2g28610 PRS (PRESSED FLOWER) C.G. S.X.
0.02 4e-2 40 Os03g0713000 9631.m04933 - Threonine deaminase 8e-23 At3g10050 OMR1 (L-O-METHYLTHREONINE RESISTANT 1) C.G. S.X.
0.02 4e-2 40 Os06g0618000 AK110866.1 - Conserved hypothetical protein 8e-1 At5g63480 unknown protein C.G. S.X.
0.02 4e-2 40 Os09g0485600 AK063705.1 - The start codon is not identified. 5e-3 At1g08290 zinc finger (C2H2 type) protein (WIP3) C.G. S.X.
0.01 1e-2 42 Os11g0608000 AK068694.1 - Hypothetical protein 1e-1 At2g30560 glycine-rich protein C.G. S.X.
0.01 4e-2 40 Os01g0181600 NM_189563.1 - - 1e+0 At4g17810 nucleic acid binding / transcription factor/ zinc ion binding C.G. S.X.
0.01 4e-2 40 Os07g0435900 AK067172.1 - SRA-YDG domain containing protein 4e-1 At5g19090 heavy-metal-associated domain-containing protein C.G. S.X.
0.01 4e-2 40 Os12g0285600 AK069104.1 - Oxysterol-binding protein family protein 3e-26 At1g13170 ORP1D (OSBP(OXYSTEROL BINDING PROTEIN)-RELATED PROTEIN 1D) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 5e+0 32 Arabidopsis thaliana At5g06020 830489 self-incompatibility protein-related F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P - - - C.G. S.X.
0.15 1e-4 48 Glycine max Gma.5710.1.S1_at AI442566 - - 7e-5 At4g08230 glycine-rich protein C.G. S.X.
0.35 4e-82 303 Hordeum vulgare Contig4804_at Contig4804 - - 1e-1 At1g72600 hydroxyproline-rich glycoprotein family protein C.G. S.X.
0.22 8e-12 71 Populus trichocarpa PtpAffx.12741.1.A1_at CV234093 - - 8e-2 At4g08230 glycine-rich protein C.G. S.X.
0.30 6e-40 165 Triticum aestivum Ta.17270.1.S1_at CA619221 - - 1e+0 At2g45420 LBD18 (LOB DOMAIN-CONTAINING PROTEIN 18) C.G. S.X.
0.23 3e-5 48 Vitis vinifera 1622126_at CF568916 - - 7e-8 At4g08230 glycine-rich protein C.G. S.X.
0.29 3e-43 174 Zea mays Zm.7704.1.A1_at BM079575 hypothetical protein LOC100278612 - 5e-3 At1g62240 unknown protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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