CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os03g0212700

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 98.9 Os03g0212700 AK120113.1 - Cytochrome C reductase-processing peptidasesubunit I, MPP subunit I, P55 6e-18 At3g02090 mitochondrial processing peptidase beta subunit, putative S.X. H.G.
0.77 93.1 Os12g0255600 CF316640 - Endonuclease/exonuclease/phosphatase familyprotein 3e+0 At5g02980 kelch repeat-containing F-box family protein S.X. H.G.
0.67 87.2 Os12g0285200 9640.m01846 - - 2e-1 At5g60030 unknown protein S.X. H.G.
0.53 71.3 Os12g0490900 9640.m02971 - - 5e-2 At5g63400 ADK1 (ADENYLATE KINASE 1) S.X. H.G.
0.50 68.0 Os05g0418250 9633.m03203 - - 2e+0 At3g58370 K-Cl Co-transporter type 1 protein-related / KCC1 protein-related S.X. H.G.
0.40 51.1 Os08g0373900 9636.m02837 - - 2e+0 At4g20780 calcium-binding protein, putative S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
284.7 100.0 GSM422676 Control GSE16865 Heterologous microarrays for the study of drought stress in Musa
112.9 100.0 GSM422674 Musa_DNA_RICE GSE16865 Heterologous microarrays for the study of drought stress in Musa
5.6 96.9 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
3.5 95.3 GSM377085 Genomic DNA - 45 day old leaf sample - mutant f2045 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
2.3 93.0 GSM377082 Genomic DNA - 45 day old leaf sample - mutant g9799 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
1.8 91.1 GSM377081 Genomic DNA - 45 day old leaf sample - mutant g7534 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
1.5 89.4 GSM377074 Genomic DNA - 45 day old leaf sample - mutant g282 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
1.1 85.9 GSM377080 Genomic DNA - 45 day old leaf sample - mutant g6728 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
1.0 84.6 GSM377073 Genomic DNA - 45 day old leaf sample - mutant d2943 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
0.9 83.3 GSM377078 Genomic DNA - 45 day old leaf sample - mutant g6603 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.04 4e-8 61 Os01g0711100 AF271294.1 - Peptidase M16, C-terminal domain containingprotein 9e-1 At3g02090 mitochondrial processing peptidase beta subunit, putative C.G. S.X.
0.02 1e-5 54 Os01g0966300 AK073175.1 - Mitochondrial processing peptidase 2e-4 At1g51980 mitochondrial processing peptidase alpha subunit, putative C.G. S.X.
0.01 1e-2 44 Os06g0150100 AK068890.1 - Conserved hypothetical protein 6e-1 At4g04780 MED21 (MEDIATOR 21) C.G. S.X.
0.01 6e-1 38 Os01g0921100 9629.m06877 - Conserved hypothetical protein 6e-1 At1g36622 unknown protein C.G. S.X.
0.01 6e-1 38 Os01g0946800 NM_186132.1 - Cold shock protein-1 4e-1 At4g26230 60S ribosomal protein L31 (RPL31B) C.G. S.X.
0.01 6e-1 38 Os08g0429300 9636.m03330 - - 1e-3 At3g44720 ADT4 (arogenate dehydratase 4) C.G. S.X.
0.01 6e-1 38 Os09g0478600 AK109529.1 - The start codon is not identified. 5e+0 At3g06890 unknown protein C.G. S.X.
0.01 6e-1 38 Os09g0542800 9637.m03137 - TPR-like domain containing protein 2e-1 At3g61260 DNA-binding family protein / remorin family protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.07 6e-18 93 Arabidopsis thaliana At3g02090 821084 mitochondrial processing peptidase beta subunit, putative F:metalloendopeptidase activity, catalytic activity, zinc ion binding, metal ion binding;P:proteolysis;C:in 11 components;BOMFPAV - - - C.G. S.X.
0.27 3e-14 81 Glycine max Gma.1751.2.S1_at AI443536 - - 2e-84 At3g02090 mitochondrial processing peptidase beta subunit, putative C.G. S.X.
0.60 0 1417 Hordeum vulgare Contig2823_at Contig2823 - - 6e-36 At3g02090 mitochondrial processing peptidase beta subunit, putative C.G. S.X.
0.21 1e-29 133 Populus trichocarpa Ptp.2312.1.A1_at CA928446 hypothetical protein - 7e-62 At3g02090 mitochondrial processing peptidase beta subunit, putative C.G. S.X.
0.60 0 1318 Triticum aestivum Ta.27578.1.S1_at CN013235 - - 1e-43 At3g02090 mitochondrial processing peptidase beta subunit, putative C.G. S.X.
0.21 1e-38 161 Vitis vinifera 1612412_at CB005149 hypothetical protein LOC100259477 - 5e-104 At3g02090 mitochondrial processing peptidase beta subunit, putative C.G. S.X.
0.38 2e-121 436 Zea mays Zm.5860.1.A1_at CK826714 Hypothetical protein LOC100191520 - 2e-14 At3g02090 mitochondrial processing peptidase beta subunit, putative C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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