CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os03g0210700

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 98.9 Os03g0210700 AK099456.1 - Hypothetical protein 2e+0 At1g17480 IQD7 (IQ-domain 7) S.X. H.G.
0.83 95.8 Os01g0501700 AB050885.1 - OsTATC protein 1e-21 At2g01110 APG2 (ALBINO AND PALE GREEN 2) S.X. H.G.
0.67 87.2 Os03g0322600 AK067222.1 - Hypothetical protein 4e-2 At5g22340 unknown protein S.X. H.G.
0.67 87.2 Os09g0530000 AK062568.1 - Rhodanese-like domain containing protein 2e-7 At4g27700 rhodanese-like domain-containing protein S.X. H.G.
0.60 79.7 Os01g0805200 AK066239.1 - Conserved hypothetical protein 8e-6 At3g17930 unknown protein S.X. H.G.
0.44 58.1 Os03g0850600 AK067191.1 - Conserved hypothetical protein 6e-1 At5g42450 pentatricopeptide (PPR) repeat-containing protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
11.1 98.2 GSM207558 Mudanjiang8 OsWRKY13 Overexpressing D11UM1-1 rep1 GSE8380 Rice Gene Network Inferred from Expression Profiling of Plants Overexpressing OsWRKY13
11.0 98.2 GSM207562 Mudanjiang8 OsWRKY13 Overexpressing D11UM7-2 rep1 GSE8380 Rice Gene Network Inferred from Expression Profiling of Plants Overexpressing OsWRKY13
10.6 98.1 GSM207559 Mudanjiang8 OsWRKY13 Overexpressing D11UM1-1 rep2 GSE8380 Rice Gene Network Inferred from Expression Profiling of Plants Overexpressing OsWRKY13
10.2 98.0 GSM207565 Mudanjiang8 wild type control rep1 GSE8380 Rice Gene Network Inferred from Expression Profiling of Plants Overexpressing OsWRKY13
9.9 98.0 GSM207564 Mudanjiang8 OsWRKY13 Overexpressing D11UM7-2 rep3 GSE8380 Rice Gene Network Inferred from Expression Profiling of Plants Overexpressing OsWRKY13
9.4 97.9 GSM207560 Mudanjiang8 OsWRKY13 Overexpressing D11UM1-1 rep3 GSE8380 Rice Gene Network Inferred from Expression Profiling of Plants Overexpressing OsWRKY13
9.4 97.9 GSM207566 Mudanjiang8 wild type control rep2 GSE8380 Rice Gene Network Inferred from Expression Profiling of Plants Overexpressing OsWRKY13
9.2 97.9 GSM207563 Mudanjiang8 OsWRKY13 Overexpressing D11UM7-2 rep2 GSE8380 Rice Gene Network Inferred from Expression Profiling of Plants Overexpressing OsWRKY13
8.8 97.8 GSM207567 Mudanjiang8 wild type control rep3 GSE8380 Rice Gene Network Inferred from Expression Profiling of Plants Overexpressing OsWRKY13
7.5 97.5 GSM421695 XOO, 8 hai - rep1 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 4e-3 44 Os07g0418700 AK105945.1 - Conserved hypothetical protein 2e+0 At5g22950 VPS24.1 C.G. S.X.
0.01 7e-2 40 Os02g0578000 AK064085.1 - Conserved hypothetical protein 1e-11 At1g78270 AtUGT85A4 (UDP-glucosyl transferase 85A4) C.G. S.X.
0.01 7e-2 40 Os09g0569200 AK070300.1 - Beta-amylase (EC 3.2.1.2) (1,4-alpha-D-glucanmaltohydrolase) 8e-17 At4g00490 BAM2 (BETA-AMYLASE 2) C.G. S.X.
0.01 3e-1 38 Os08g0411300 9636.m03173 - Conserved hypothetical protein 9e-4 At1g75550 glycine-rich protein C.G. S.X.
0.01 3e-1 38 Os12g0563000 9640.m03651 - Phospholipid/glycerol acyltransferase familyprotein 2e-1 At3g50250 unknown protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 2e+0 34 Arabidopsis thaliana At1g17480 838321 IQD7 (IQ-domain 7) F:calmodulin binding;P:biological_process unknown;C:cellular_component unknown;PMFO - - - C.G. S.X.
0.03 1e-2 42 Glycine max Gma.9618.2.A1_at CD392808 - - 3e+0 At2g25570 binding C.G. S.X.
0.25 6e-33 141 Hordeum vulgare Contig16125_at Contig16125 - - 7e+0 At4g28397 - C.G. S.X.
0.04 1e-2 42 Populus trichocarpa PtpAffx.91816.1.S1_at DN484981 - - 8e-1 At4g07868 unknown protein C.G. S.X.
0.20 2e-31 137 Triticum aestivum Ta.8072.1.S1_at CD927246 - - 2e+0 At5g06060 tropinone reductase, putative / tropine dehydrogenase, putative C.G. S.X.
0.03 3e-3 42 Vitis vinifera 1614892_at CF511230 - - 1e+0 At5g29000 myb family transcription factor C.G. S.X.
0.03 9e-1 34 Zea mays Zm.6469.1.S1_at BE345306 - - 4e+0 At3g03405 - C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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