CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os03g0195300

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 98.9 Os03g0195300 AK067353.1 - Low affinity sulphate transporter 3 3e-1 At1g77990 AST56 S.X. H.G.
0.57 77.0 Os02g0158300 AU162361 - KpsF/GutQ family protein 5e-13 At3g54690 sugar isomerase (SIS) domain-containing protein / CBS domain-containing protein S.X. H.G.
0.50 68.0 Os08g0445000 AK106866.1 - Zn-finger, RING domain containing protein 1e-3 At5g57750 zinc finger (C3HC4-type RING finger) family protein S.X. H.G.
0.36 44.0 Os01g0857600 CB965854 - Conserved hypothetical protein 8e-2 At4g17480 palmitoyl protein thioesterase family protein S.X. H.G.
0.33 38.8 Os03g0294800 AK066380.1 - Protein kinase domain containing protein 4e-3 At2g40270 protein kinase family protein S.X. H.G.
0.31 34.5 Os12g0126000 AK067521.1 - Multi antimicrobial extrusion protein MatE familyprotein 6e-5 At1g33110 MATE efflux family protein S.X. H.G.
Click here to hide the above table.

Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
22.5 99.3 GSM99872 TCHW P15_agami control, biological rep3 GSE4438 Expression data from rice under salinity stress
20.3 99.1 GSM99871 TCHW P14_agami control, biological rep2 GSE4438 Expression data from rice under salinity stress
14.6 98.6 GSM99870 TCHW P13_agami control, biological rep1 GSE4438 Expression data from rice under salinity stress
13.5 98.5 GSM255762 wt collar chip GSE12097 antiOsLIC collar chip
9.7 98.0 GSM304485 Control for the unstable lines (1) GSE12069 Mycroarray analyses reveal that plant mutagenesis may induce more transcriptomic changes than transgene insertion
9.3 97.9 GSM99875 TCHW P18_agami salt stress, biological rep3 GSE4438 Expression data from rice under salinity stress
8.3 97.7 GSM422676 Control GSE16865 Heterologous microarrays for the study of drought stress in Musa
8.1 97.7 GSM422672 Drought GSE16865 Heterologous microarrays for the study of drought stress in Musa
8.0 97.6 GSM375769 gid2-1_ shoot_replicate 1 GSE15046 Transcriptome analysis of gibberellin-signaling mutants in rice
7.9 97.6 GSM99874 TCHW P17_agami salt stress, biological rep2 GSE4438 Expression data from rice under salinity stress
Click here to hide the above table.

Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.10 1e-14 83 Os03g0195500 AK111395.1 - Sulfate permease (Fragment) 8e-10 At5g10180 AST68 C.G. S.X.
0.02 6e-1 38 Os04g0652400 AK072809.1 - Sulphate transporter protein 6e-15 At1g23090 AST91 (SULFATE TRANSPORTER 91) C.G. S.X.
0.01 2e-1 40 Os03g0195800 AK103007.1 - - 4e-13 At1g78000 SULTR1 C.G. S.X.
0.01 6e-1 38 Os03g0424600 AK101882.1 - Conserved hypothetical protein 4e-1 At3g22820 allergen-related C.G. S.X.
0.01 6e-1 38 Os11g0646300 9639.m03936 - Hypothetical protein 1e-1 At5g20930 TSL (TOUSLED) C.G. S.X.
0.01 2e+0 36 Os02g0499800 9630.m02831 - - 2e-1 At4g09300 - C.G. S.X.
0.00 2e+0 36 Os02g0663300 9630.m04293 - Beige/BEACH domain containing protein 2e-11 At2g45540 WD-40 repeat family protein / beige-related C.G. S.X.
Click here to hide the above table.

Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.07 3e-1 38 Arabidopsis thaliana At1g77990 844134 AST56 cDNA encoding a sulfate transporter. - - - C.G. S.X.
0.04 3e-2 42 Glycine max GmaAffx.84948.1.S1_at AW596695 - - 2e-5 At1g77990 AST56 C.G. S.X.
0.14 1e-17 91 Hordeum vulgare Contig20387_at Contig20387 - - 2e+0 At1g61060 F-box family protein C.G. S.X.
0.15 2e-18 95 Populus trichocarpa PtpAffx.201905.1.S1_at pmrna3798 sulfate/bicarbonate/oxalate exchanger and transporter sat-1 - 3e-13 At5g10180 AST68 C.G. S.X.
0.09 3e-17 91 Triticum aestivum Ta.6012.1.S1_a_at BJ266501 - - 3e+0 At5g16640 pentatricopeptide (PPR) repeat-containing protein C.G. S.X.
0.03 2e-2 40 Vitis vinifera 1617400_at BQ798101 hypothetical protein LOC100245945 - 1e-1 At1g51010 unknown protein C.G. S.X.
0.12 2e-16 87 Zea mays Zm.10545.1.A1_at BQ538220 hypothetical protein LOC100193294 - 6e-1 At5g10180 AST68 C.G. S.X.
Click here to hide the above table.

Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
L GO:0008272 The directed movement of sulfate into, out of, within or between cells.
Click here to hide the above table.

Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
Click here to hide the above table.

Back to the CoP portal site

Back to the KAGIANA project homepage